Lates calcarifer (barramundi perch): 108897237
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Entry
108897237 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: peptidylprolyl isomerase Fa
KO
K09565
peptidyl-prolyl isomerase F (cyclophilin D) [EC:
5.2.1.8
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108897237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108897237
Enzymes [BR:
lcf01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
108897237
Chaperones and folding catalysts [BR:
lcf03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
108897237
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
108897237
NCBI-ProteinID:
XP_050932659
UniProt:
A0AAJ8BIT2
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Position
LG16_LG22:9573493..9575758
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AA seq
190 aa
AA seq
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MIQIKNCVRYSSLGIAAKRVFSSGPTKNPVVFLDIEADGEPLGRIIIELNADVVPKTAEN
FRALCTGEHGFGYKGCVFHRVIPEFMCQGGDFTKHNGTGGKSIYGKNFKDENFKLKHTGP
GTLSMANSGPNTNGSQFFISTTKTEWLDGKHVVFGQVKEGMDVVTKMESFGLHDGGVIKK
IVITDCGEVK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaataaaaaactgcgtgaggtacagctcgctgggcatcgccgcaaagagggtg
ttttcctctggtcccaccaagaacccggtcgtgtttctggacatcgaggccgacggcgag
cctctcgggagaataatcattgagttgaatgcagatgtcgtgccaaagactgcagaaaac
ttcagagcattgtgcacaggggaacatggctttggatacaagggatgtgtgttccacagg
gtcatacctgagttcatgtgtcagggaggagacttcactaaacataatggcacaggaggg
aaatctatatatgggaaaaactttaaagatgaaaacttcaaattaaaacacactggtcca
ggaactctctccatggcaaactctgggccaaacaccaacggctcccagttcttcatttct
acgaccaaaactgaatggcttgatggtaaacacgtggtgtttgggcaggtcaaggaaggc
atggacgtggtcaccaagatggaatcctttggtttacacgatggcggtgtgatcaagaaa
attgtcatcactgactgtggggaagtcaaataa
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