Lates calcarifer (barramundi perch): 108897242
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Entry
108897242 CDS
T04895
Name
(RefSeq) DNA polymerase eta
KO
K03509
DNA polymerase eta [EC:
2.7.7.7
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108897242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108897242
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108897242
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
108897242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
POLH-Rev1_HhH
zf_UBZ
IMS_HHH_1
IMS_C
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
108897242
NCBI-ProteinID:
XP_018552290
UniProt:
A0A4W6DGM7
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Position
LG16_LG22:10135460..10140631
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AA seq
738 aa
AA seq
DB search
MEYGKERVVALVDMDCFYVQVEQRLNPALRNTPCVVAQYKTWKGGSIIAVSYEARAYGVT
RNMWVDDAKQLCSDLQVARVRESHGKADLTHYREASVEVIEVMSRFAVIERASIDEAYMD
LTAAVQQRLKDMTDKQVEPHLLRTTYIQGYPQSAEDAILDKEEQRSRGLQQWLASLPVPL
SGGQSSADLQLAVGALIVEEMRAAVEKHTGFRCSAGISHNKVLAKLACGLNKPNRQTVVP
LDSVTELFSSLPISKIRNLGGKLGASITETLGIENMGDLTRFSQAQLTQHFGEKTGQWLY
DLCRGIEFEAVKPRQLPKSIGCSKNFPGKTSLATKEQVQYWLNQLALELEERLTKDREVN
GRVAKLLTVGVRQLGDKKQSSFSRCCALVRYEATKISIDSFAIIRSLNTAGNHQVTWTPP
LTMLHLSASKFSDAPSAGGIAGFLSSDVSSTQSLSSATQSSRRPRSELKNNSTCKQPGSI
QSLFQKAAEKQRQKVTKEDDEEDEDEDEDTCSSIFPKTSAGGQLETDTNCLVSSFILSSD
SKNSSSGNRGISSFFHKKSLERTLQAPASTVSEPDKPGAVNKKENSEDNGAVVSGLEEEP
CSEFTSHQTPCEEIKDELDIDPGENHHPPSVAKEDLLNCERCGQEVSVWEMPEHNDYHFA
LDLQNSLSSSASSAAVSTSSSTAFPSSFSASPLRAGAAGTAQSTRGKTKTRGQSGPQPKR
PRSQGGSMGTLDSFFKRN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggagtatggaaaagaaagagtggtggcgttagtcgacatggactgtttttacgtgcag
gtggagcagaggttgaatccagctctgaggaacaccccctgtgtggtggcacagtacaag
acgtggaaaggaggcagtatcatagctgtgagctacgaggccagggcctatggtgtcacc
aggaacatgtgggtggatgatgcaaagcaactgtgctcagatctccaggtggcacgagtg
cgcgaatctcatggcaaggcagacctaacacattacagggaggcgagtgtggaggtgatc
gaggtgatgtctcgctttgctgtgattgaaagagccagcattgacgaggcctacatggat
ctgactgctgcagtccagcagcggttgaaagacatgactgacaaacaagtagagcctcac
ctgctgagaacgacctacatccaggggtacccacaaagtgcagaggacgctatcttagat
aaagaggagcagaggtccagaggtctccagcagtggctggcatccttacctgtccctctg
tcaggggggcagagctctgcagatctgcagctagccgtgggggctctcattgttgaggag
atgagagcagctgtggagaaacacacaggtttccgttgttcagcagggatatcacacaat
aaggtgctggccaaactagcctgtggtctgaacaaacctaaccgacaaactgttgtgcct
ttggactctgtaacagaacttttcagctctttacccatcagcaaaatccgtaacctgggg
ggtaagctgggagcctccatcacagaaactctgggaatagagaacatgggagatttaact
cgcttctctcaggcacagctgacacagcactttggagaaaaaacaggccagtggctgtat
gacctgtgtcgggggatcgagtttgaagcagtgaaacccagacagcttcccaagtccatc
ggctgcagtaaaaactttcctgggaagacatcacttgctactaaagaacaggtacagtac
tggcttaatcaactggctcttgagctggaggagaggctgaccaaggacagagaagtgaac
ggtcgagtagccaagttgttgacagttggtgtgcgtcagcttggggataaaaagcagagc
agcttctctcgctgttgtgctttagtgcgctatgaagcaaccaaaatatccatagacagc
tttgccattatcaggagcctcaacacagcaggaaaccaccaggttacatggactccaccc
ctcaccatgctacacctctcagctagcaaattcagtgatgccccatcagcagggggcatt
gctggtttcctctccagcgatgtgtcttcaacccagagcctttcctctgccactcagtcc
tccagaaggccacgctctgagctgaaaaataactcaacatgcaaacaacctggcagtatt
caatccctctttcaaaaggcagctgaaaaacaaagacagaaggtaacaaaagaagacgac
gaggaggatgaggatgaagatgaagatacgtgttcctccatctttcccaaaacatctgct
ggtggtcagttagagacagataccaattgcctggtttcttccttcatactttcctctgac
tctaaaaatagttcatctggcaatcgtggaatttcctctttcttccataagaagagtctt
gaaagaactctacaggccccagcatcaacagtgagcgagccagacaaacctggagctgtc
aataaaaaagaaaattcagaagacaatggtgctgttgtgtcaggcctggaggaagaacct
tgttcagagtttacatctcaccagacaccatgtgaagagataaaggatgaactggacatt
gacccaggggaaaatcaccatccacccagtgtggccaaagaagacctcttaaactgtgag
cgctgcggccaggaggtgtcagtctgggaaatgcctgagcacaacgactatcactttgcc
ctggacctccagaattcactctcttcatctgcaagttcagcagctgtatctacctcttcc
tccactgctttcccctcttctttttctgcatctcctctcagagcgggagctgcaggcaca
gcccagtccacccggggcaagacaaaaaccagaggccagtcgggaccccaaccgaaaaga
ccccgctctcaaggtggaagtatgggcacactggattctttcttcaagaggaactga
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