Lates calcarifer (barramundi perch): 108897248
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Entry
108897248 CDS
T04895
Symbol
zmiz1a
Name
(RefSeq) zinc finger MIZ domain-containing protein 1a isoform X1
KO
K22403
zinc finger MIZ domain-containing protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
108897248 (zmiz1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zmiz1_N
zf-MIZ
zf-Nse
Motif
Other DBs
NCBI-GeneID:
108897248
NCBI-ProteinID:
XP_018552298
UniProt:
A0AAJ7VG88
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Position
LG16_LG22:9478021..9572746
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AA seq
1107 aa
AA seq
DB search
MNTLPSMDRHIQQTNDRLQCIKQHLQNPANFHSAATELLDWCGDPRAFQRPFEQSLMGCL
TVVSRVAAQQGFDLDLGYRLLAVCAANRDKFTPKSAETTTCRRCQSDSALLSSWCEELGR
LLLLRHQKNRQNEPQGKVPMQPSMSSMKPGLTHSDGSFPYDSVPWQQNTNQPPGSLSVVT
TVWGVTNTSQSQVLGNPMANSNNPMNPGGNPMGSGMSASAGGLNSPQFSAQQQQFPNKGG
SNQPYMQQGMYSRPGYPGGPGGYSGSYSGGPNAPPGGMGMTSHTRPPGDFTQPAAAAAAA
AVAAAAATATATATATVAALQETQNKDMNQYGQMCPSFQMGPAQAYNSQFMNQPGPRGPP
GGMNPASMGSAMNNPNMSGPPMGMNQTRTPGMGHFGAHGQRMPQQGYPGGPRQGMPMQGM
KRPYPGEASYGNQQYGPNSQFPPQQGQYPTSNASRPLPSPNYPGQRMPGQQGQGQYPPGM
PMGQYYKQEPFNGQSTNFSGGGYSYGQGNGPPRPGNYPHSPVPGNPTPPMTPGSSIPPYL
SPNQDVKPPFPPDMKPNMTALPPPPTNPNEELRLTFPVRDGVVLEPFRLEHNLAVSNHVF
HLRPSVHQTLMWRSDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKP
LHLKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIK
RNFSSVAASAGNTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLESYL
QLNCERGTWRCPVCNKTALLEGLEVDQYMWGILNAIQNSEFEEVTIDPTCSWRPVPIKSE
LHIKEDPDGPLAKRFKTMSPSQMTMPNVMEMIAQLGPGPGPGPGPGPGPGPSPYPPHPGQ
HASGNGGDYPGAGNSYHSQGNFDFPHGNPSGGGVGGGGGGGGPPMNDFIHGPQLSHPPDG
PGGLLSQDKPLNHGMNDAMSHPDQSHNSMQQSLHASPHPGSQTGPPLHHGGQSGPPLHHS
GQSSQPPRQSQPQPQPQQPGQNSHPHSDLNFNPSSDGQMGQGAQDMPEPSLDLLPELANP
DELLSYLDPPDLPANSNDDLLSLFENN
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgttaccatcaatggaccggcacatccagcagaccaatgacaggctgcagtgc
attaaacagcacttacagaacccggccaacttccactcagcagccacagagctgctcgac
tggtgtggagatccccgggccttccagcgacctttcgagcaaagtctcatgggatgtctg
acggtggtgagtcgcgttgctgctcagcaggggtttgacttggacctgggctacaggttg
ctggctgtgtgtgctgccaacagggacaaattcacacccaaatctgcagaaaccaccacc
tgcaggagatgtcagagtgactcagccctgctgtcgtcgtggtgcgaggagctgggtcgc
ctcctcctgctgcgtcaccagaagaacaggcagaacgaaccgcagggaaaggtccccatg
cagcccagcatgagcagcatgaagcccggcctcacacacagtgatggatcctttccctat
gactctgtcccctggcaacaaaacaccaaccagccccctgggtcattgtccgtggttaca
acagtgtggggcgtgaccaacacgtcacagagtcaggtgctgggtaacccaatggcgaac
agcaataaccccatgaatcctggaggtaaccctatgggatcgggtatgtctgccagcgca
ggtgggctcaactcacctcagttcagtgctcagcagcaacagttcccaaacaaaggaggc
tccaaccaaccgtacatgcagcagggcatgtacagcaggcctggctacccaggaggtcct
gggggatacagcggaagttactctggaggcccaaacgcccctccaggaggtatgggaatg
acctcccatacacgtcctcctggtgacttcactcagccagctgccgctgcagcagcagct
gctgtcgctgccgccgctgctacggcaacggccacagcaacggccacagtagcagctttg
caggaaacccagaataaagatatgaatcagtatggacagatgtgtccatcgttccaaatg
ggacccgctcaggcctacaatagccagttcatgaaccagccaggcccacgaggcccccct
ggaggtatgaatccagccagcatgggatcagcaatgaacaaccctaatatgagtgggcca
cccatgggcatgaaccagactcgaaccccaggcatgggacattttggggctcacggccaa
aggatgcctcagcaggggtatcctggaggacctcggcagggcatgcccatgcaggggatg
aagaggccgtatcctggggaggcaagttacgggaatcagcagtacgggccgaacagtcag
ttcccaccacagcaggggcagtaccccacgtcaaatgcctccaggccgctgccctctcct
aactaccccggccagaggatgccagggcagcagggccagggacagtacccacctggcatg
cccatgggccagtattacaagcaagaacctttcaacgggcagagcaccaacttctctgga
ggtggatactcctacggtcaaggcaatgggccccccaggcccggtaactacccccactcc
ccagtccctggaaaccccacaccccctatgaccccaggaagtagtattcctccgtacctg
tcgccaaaccaggatgtgaaacccccatttccacccgacatgaaaccaaatatgacagca
cttccgcctcctccgactaaccccaatgaggagctgcggctgacgttcccagtcagggat
ggagtggtgctggagccgttccgcttggagcacaacctggctgtcagcaaccatgtcttc
caccttcgaccctccgtccaccagaccctcatgtggaggtcagacctcgagctgcagttt
aagtgctaccaccacgaagacaggcagatgaacaccaactggcctgcttccgtccaggtc
agcgtcaacgccacccccctcaccattgagaggggagacaacaaaacctcccacaaaccc
ctgcacctgaagcacgtatgccaacctggaagaaacaccatccagattacagtcaccgcc
tgctgttgttcccacctgtttgtgctgcagctggtccacaggccatctgtgcgatccgtc
ctccaggggctcctgaagaagagactccttcctgcagaacactgcatcaccaagatcaag
aggaacttcagcagcgtggcggcctcggcgggcaacaccacccttaacggggaagacggc
gtggagcagacagccattaaagtgtcgctgaaatgtcccatcaccttccgacgcatccag
ctaccagcgcgagggcacgactgcaaacatgtccagtgttttgatctggagtcctactta
cagctcaactgtgagagggggacatggaggtgtcctgtgtgcaataaaacagcattatta
gaaggtctggaggtagatcagtacatgtggggaattctcaatgccatccaaaattcggag
tttgaagaggtcactatagatccaacatgtagctggcgacctgtccccattaagtctgag
ctacacatcaaagaggacccagacgggccactggccaagcgctttaagaccatgagcccc
agtcagatgaccatgcccaatgtgatggagatgatcgcccagctagggcccggtccgggg
ccaggtccaggacctgggcccggaccgggtcccagcccctaccccccacaccctggtcaa
catgcgagtggcaacgggggagattacccaggagcaggcaacagttaccacagccaaggg
aactttgacttccctcatgggaacccctctggtggtggagttggaggaggtggtggtggc
ggaggtccccctatgaatgacttcatccatggcccacagctctctcaccccccagatgga
cctggtggtctcctctcccaggacaaaccccttaaccacggcatgaatgatgcaatgtcc
catcccgatcagtcccataactccatgcagcagagcttgcatgcatctccccaccccggc
agccaaacggggccgcccttacatcacggcggccagtcagggccacccttgcatcacagc
ggccagtcatcgcagccgcctcgccagtcgcagcctcagccgcagcctcagcagcctggg
cagaacagtcacccccacagcgatctgaactttaacccctcctcagatgggcagatgggt
cagggagcccaggatatgcctgaaccctccctggatttgctcccagagctggccaaccca
gacgagttgttgtcatacctggaccctcctgaccttcccgccaacagcaatgatgacctt
ctctccctctttgagaacaactag
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