Lates calcarifer (barramundi perch): 108897277 Help Entry 108897277         CDS       T04895                                  Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism lcf  Lates calcarifer (barramundi perch) Pathway lcf04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:lcf00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     108897277 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  108897277 NCBI-ProteinID:  XP_050932601 UniProt:  A0AAJ8BHY7 LinkDB All DBs Position LG16_LG22:10674804..10698869 Genome browser AA seq 1917 aa AA seqDB search MDELTRQMDISGGLSGERVVTETITSTTRLTSLPPKGTSGSNHRNMSSSAGGLGLEKNVL TQNSSGTYFSSSSVGVNTSSYSSSSGVYLGGDSSGGGEGGGGYLDGEGYRSGGGGSSYIV SSVSKVRSSSSGGARRAQTAGSSGGLSPAFRERKNISSRSGGYDGSSSANSSPEFTRKDY GNYCSSATRGRSESRESEIRARLQSASPTACRWTELDDVKKLLKGRSSSVSPTRSSSASM TLPVPKKASVEAKTVSVATQSVSTSFGPGVRSAGFNTIDTSGLYDTGLTNGQFNTGVKNG QYDITLISSQYDTGVKSGHYDSSLKSGQYDTGVKSGQYDATLKSGQYDTSIKSGQYDVTL KSGQYDTSIKSGQYDATLKSGQYDTSIKSGQYDVTLKSGQYDTGVKSGQYDSMTSMRSGQ YDTALRSGQYDTLDATLPSFSWSTSTLPSSTTVVAGNTSSYTYQVSTNNMGGTTLLAPTS PSSLSVYGFQNNLAPTSGSVLTTSGANVNANLGGYGVQKNVSNGGGVVSTGVSTTTRSQT DEAYKKDYKFLISDKENVPAKRDTEMLILAKDSGKQFTSQQQRSSRRRSILDLHSPPNQS QYRTNMLEPNKYDKSSVKSISNFIGSLSGDSIKKEKLISSYSETAPLKTETGNSYYGSSG VIMKDKATYAEIHRDSGIFGGGGFCCCSDSCCSWWKWLLGLLLLSLLLLGLLFGLIALAE DVRKLKNRVAALEAESSVVSARTSRFSSSSNDIYVAGGGGTHTDTTVHLGAGGGGGGSTS KTQIGIAAGAGGGSSGNDVGVGVAGAGAGAGDTNGARVGGAGTSSSGSSGGAGTSSSSSS GGAGTSSSGSSGGAGTSYSGTSSSSGTSYSGTSGSTGTSYSGTAFGVGVSGGYVDAVALQ VAIQRVLRAEMQSHAFTVYGERGPPGPKGDTGAKGDPGFPGIPGPPGALGHAGPEGPKGQ KGSPGDHGLEGPPGLRGREGPVGPRGEPGPAGFGVKGDRGAPGSPGVPGPVGLAGADGPK GAPGVPGLSGPPGQPGPQGFRGEAGPPGSKGDRGLAGFQGAKGDPGDKGPRGLPGDPGLP GLPGVAGEKGSKGSMGLAGHDGAKGSRGDQGPAGPPGLRGPAGPPGDAGLPGAPGLQGPP GIPGNPGQPGAKGDTGEAGRIINAAGSSSIAIPGPPGPAGPPGPAGPPGLSGPIGPAGLP GQPGPKGDRGYKGDQGEPGITVRRTETISSTRAESQYGAAGDSRLAGPPGPPGPPGPPGR PGDSRQGPPGPPGPPGQPGYGRPGPKGDKGDSGFVSSSGTYYTGPPGPPGLPGPKGSTGS PGPRGYQGEPGQPGIPGTPGSPGTSERVSTYAGGHGIPGPPGPPGPPGRQGPPGIKGDTG APGIPGSSRGSISVTSGPPGPPGPPGPPGLPGSFASSSEMRQYITDYLSRIRQAGIPGPA GPPGPPGIPGTFTGSIEDLSSRVIAYLQRSGSSSGIIVGVHGHAAPPEALSRSQLIALLQ SEDMRRYLIGPPGPPGPPGPAGHPAIQGQTQQITRHYNVEEIATYVFNIMNDRGIARGPP GPPGEPGLPGRPGPPGAGGSGFSTAMIDYSALSKNPDFRSWISSSIQQGPPGPAGAPGLP GPPGPQGPPGVSTATVYGAEGRGYSLEDIQRYLQGSGFRGLPGPPGPPGPQGPPGTFTRS VSYSGNLPRESIRAEVQEYLTSDSVRRYITGPPGPQGPQGPQGTQGPQGPQGPRGQKGER GEPGYIQTRTQSQSYSQSDSRYGSEHREIDLSKLTETLDYSNVALKVTDYIKNQGLLQEY LVEGPSRTNVRAIQGPPGPPGPPGPPGYSRVIGAYGNVTADLMDFFRTYGTIPGPPGGPG PKGDRGYPGPRGEKGDPGRPGLPGLPGSYTVQIPHRVQKRDTGNKEVGRRQQPRRQG NT seq 5754 nt NT seq  +upstreamnt  +downstreamnt atggacgagttaacgagacagatggacatctcaggaggcttgtcaggagaaagggttgtg acagaaactataacctccacaactaggctgacttctctaccaccaaagggaaccagcgga tcaaatcacaggaatatgtccagcagtgctggagggctgggcttggagaagaatgtctta acccagaacagcagtggaacttatttctcctcatcctctgttggtgtgaacaccagcagc tacagctcctcctcgggagtttacctaggaggtgactcttcaggagggggcgaaggaggg ggtggctacctagatggagaggggtacagaagcggagggggcggaagcagttatatcgtg agctcggtgtcaaaggtcaggtccagctcctcgggtggtgccaggagagcacagactgct ggctcatcaggaggcctgtcgccagctttccgggagaggaagaacatatctagccgctcg ggaggttatgacggaagttctagtgcaaattcctctccagaatttacacgaaaagattat ggaaactactgctccagtgccacaagagggaggagcgaaagcagagagagcgagatccga gccagattacaaagcgcctctcccactgcctgcagatggacggagctggacgacgtgaag aagctgctgaagggacgttccagcagcgtcagccccactcgctcctccagtgcctccatg accctgcctgtccctaaaaaggccagcgtggaagccaagaccgtctctgtggccacgcag tcggtttctacttcatttggtcctggtgtgagatcggctggattcaacaccattgataca tcaggcctctatgataccggtctgacaaatgggcagtttaatactggcgtgaaaaatggc cagtatgatatcactctgatatcaagccaatacgacactggtgtgaaatcaggccactat gattccagtctgaaatcagggcagtatgatactggtgtaaaatctggccagtatgatgcc actctgaaatcagggcagtatgatactagtatcaagtcaggacagtatgatgtcactctg aaatcagggcagtatgatactagtatcaagtcaggacagtatgatgccactctgaaatca gggcagtatgatactagtatcaagtcaggacagtatgatgtcactctgaaatcagggcag tatgatactggtgtaaaatcaggccagtacgactcaatgaccagtatgagatcaggccag tatgacaccgctttgagatcaggccaatatgacacgctggatgctacgcttccatctttc tcctggtccacctccacgctgccctcctccaccacggtggtcgctggcaacaccagtagc tacacataccaggtcagcaccaacaacatgggaggaaccacgttgctcgcccccacctca ccttcgtccctgtcagtttatggctttcagaataatctggcacccacctctggcagtgtg ctcaccaccagtggagccaacgtaaatgctaaccttggaggttatggcgttcagaagaac gtgtcaaatggtggtggtgtcgtcagcactggagtctctacaaccactagatcccaaact gatgaggcatataagaaagactataagttcttgatctccgataaggagaacgttccagca aagagggacacagagatgctcattttggccaaagacagcgggaagcagttcaccagccag cagcagcggtcttctcgtaggaggagcatcctggatttacacagtcctcctaaccaatct cagtatagaaccaacatgttagaacccaataagtatgataaaagcagtgttaaaagtatt tctaatttcatagggtcactatcaggagattcaataaagaaggagaagcttatttcaagc tacagtgagacggccccactgaagacagagacgggcaactcttactatggatcgtctgga gttataatgaaagacaaagccacctacgcagagattcacagagacagcggcatcttcgga ggtggaggattttgctgctgctccgactcttgttgctcttggtggaaatggctgctgggt cttctcctcctgtccctgcttctgctaggactcctgtttggcctcatcgcactggctgag gacgtgagaaagctgaagaatcgagtggctgccctggaggctgagtcctctgtcgtctct gctcgtaccagtcggttttcaagttcttccaatgacatctatgtggccggtggaggtggg actcacactgacaccacggtacacttgggcgctggaggtggaggtggagggtcaacttcc aaaacacaaatcggaattgccgctggtgctggtggcggttctagtggcaatgatgtcggc gttggcgttgctggtgctggtgctggtgctggtgataccaatggggccagagttggaggt gccggcaccagctccagtggcagctctggtggtgctggtaccagctccagtagtagctcc ggtggtgctggtaccagctccagtggcagctctggtggtgctggtaccagttacagcggc acctccagcagttctggtaccagctacagtggcacctccggcagtaccggtaccagttac agtggcactgcctttggtgtcggcgtgagtggaggatacgtagatgctgttgctcttcag gtggcgatccagcgtgtgctcagagctgaaatgcagtcacatgcattcacagtgtatgga gaaagagggccgcctggacctaaaggggacactggagctaaaggtgatcctggtttccct ggaattccaggtcctccaggcgcgttaggacatgcaggccctgagggtcctaaaggacaa aaaggaagcccaggtgatcatgggctggaggggccaccaggtctcaggggtcgtgagggc ccagttggccccagaggtgagccaggacctgcaggatttggagtgaaaggtgacagaggt gctcctggaagtcctggggttcctgggcctgtgggacttgccggagcagatggaccaaaa ggcgcaccaggagttcctgggctttctgggccaccaggtcaaccaggtcctcagggtttc cgtggcgaggcagggcctcctgggtctaaaggtgacagagggctggctggatttcaagga gctaaaggtgaccctggtgacaaaggccccagaggactgccaggtgatcccggtttacca ggtctacctggggtggctggagagaaaggatccaaagggtcaatggggctggctggacat gatggtgcaaaaggatcaagaggtgaccaaggacctgctgggccccctggactcagagga cctgctggacctcctggagatgctggacttccaggagcacctgggcttcaaggaccacca gggataccaggaaatccaggacaaccaggtgccaaaggtgacactggtgaagcaggacga atcatcaatgcggctggttcctcttcaattgccatcccaggaccacctgggcctgctggt cctcccggccctgcaggacctcctggattatcaggtcccattggccctgctggtctgcct ggccagcctggtcctaaaggtgacagaggatataagggagaccagggagaaccaggaata acagtgagaaggactgaaactataagttcaactagggctgagagtcagtatggtgctgcc ggagattcaagattagctggcccacctggtccaccaggtccacctgggcctcctggacgt ccaggtgactcaagacaaggacccccaggaccacctgggcctccaggtcaaccaggttat ggaagaccaggacctaagggagacaaaggagactcaggctttgtatccagctctggaaca tattacactggaccaccaggaccacctgggcttcctgggcctaaaggatcaacaggttct cctggaccaaggggctaccaaggtgagccaggacagccaggtataccaggcaccccagga agccccggaacctctgagagagtgtcaacttatgctggaggacatgggatccctggacca ccaggtccacctgggcctcctggacgtcaaggaccaccaggaatcaaaggggacactgga gctccgggtattcctggctcttcaagaggctccatctcagtcacttcaggccctcctggt cccccaggtcctcctggtcctcctggcctgccgggctccttcgcgtcctctagcgagatg cgccagtacatcactgactatctaagtagaatcagacaggctggtatccctggacctgcg ggtccacctgggcctccgggaatccccggaaccttcacaggctcaatagaggacctttcc agtcgtgtcattgcatacctgcaaaggtcgggctcaagctcaggcatcattgttggtgtt cacggtcatgcagcaccacctgaggctttgtcccgcagtcaactcattgccctgcttcag agtgaggatatgaggagatacttgataggaccaccaggaccaccagggccaccagggcca gcaggacacccagcaatacaagggcaaacacaacaaattacacgccactacaatgtagaa gagattgccacatatgtcttcaacatcatgaatgacagaggaatcgctagaggtccacct gggccacctggggaacctggactacctggtcgtcctgggcctcctggtgcaggaggctct ggcttcagtaccgctatgattgactattctgcactgagtaaaaatccagacttccgctca tggatcagctcttccatacaacaaggtcctcccggtcctgcaggtgctccagggctacct ggccctcctggccctcaggggcctccaggagtctccactgccactgtgtatggggcagaa ggccgtggctacagcttggaggatattcagcgttacctgcagggttctggtttcagaggt cttcctggtcctcctggtccgcccggaccacagggcccaccaggcactttcactagatca gtttcctatagcggaaacttacctcgggagagcatccgggctgaagttcaggagtatctg accagtgacagtgttcgtcgttacatcaccggaccaccggggcctcaaggacctcaagga cctcaaggaactcaaggacctcaaggacctcaaggaccaaggggtcagaaaggagaacgt ggagagcccggttacatccagacacgcacacagagccagagctactctcagagtgactct cgctatggctctgagcacagagagatcgatctcagcaagctcaccgagacgctggactac tccaacgtcgccttgaaagttacagactacatcaagaatcaaggcctgctgcaggagtat ctggttgagggtccttccaggacaaacgtacgagcgattcaaggcccccccggtccacct ggccctcccggaccacccggttacagccgtgtcattggggcctacggcaatgtcacagct gacctcatggacttcttcagaacctatggcaccatccccggccctccaggaggccccgga ccaaagggagacagagggtacccaggacccagaggagagaagggtgatccaggacgccca ggtttaccaggattaccagggtcatacactgtccagattccacacagagtgcagaagagg gatacaggcaataaagaggttggtcgtcgtcagcagcctcgccgtcagggctaa

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