Lates calcarifer (barramundi perch): 108897407
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Entry
108897407 CDS
T04895
Name
(RefSeq) ATP-binding cassette sub-family G member 5
KO
K05683
ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1)
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108897407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108897407
Transporters [BR:
lcf02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG5, 8 subgroups
108897407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane
AAA_21
ABC2_membrane_7
SMC_N
AAA_29
AAA_23
AAA_16
NB-ARC
AAA_18
MobB
MeaB
ATP-synt_ab
DO-GTPase2
RsgA_GTPase
nSTAND1
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
108897407
NCBI-ProteinID:
XP_018552522
UniProt:
A0A4W6DQT5
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All DBs
Position
LG16_LG22:complement(13799368..13809139)
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AA seq
657 aa
AA seq
DB search
MNRFYSMQPVEPENGTKVRESFKFVSEVKRDVWRDSGEERSEPFCCLSVSKISYTVSERV
GPWWDLPSYRKRWTRQILNDVSFHVDSGQIMGILGNSGSGKTTLLDAISGRIGNCGTLLG
EVFVNGRNLKREEYQDCFSYVLQSDNLLSYLTVEETLTYTAQLALRKHSAEAIKKKVSAV
MAELSLSHVAHSVIGGRVFPGISGGERRRVSIASQLLQDPRVILLDEPTTGLDSMTANQI
VVLLAELARRNRIVIVTIHQPRSELFRVFSRIAIMSRGELVFCGQPEEMVDFFSQCGYEC
PEYCNPFDIYVDFTSVDTRSSEREAATFSRMHEITSSYQRSAIYQSMLGKIEQSLQREEK
PAIPFKSKESPSGAAKLEVLLRRTARNLSRDRMGVLMRLSQNLIYGLFVAFFVMHLDNDV
AKGAVQDRIGIIYQSVGASPYTGMLNAVALFPALRAISDQESQDGLYSKWQMFLAYIFHI
LPFSILSVFIFTSFLYWTVGMHPETLRFLCFTAVVLVPHIIGELLTVVLLGVVQDPNMVN
TGVALLNIAGILVGSGFLRSTQQMPVVFQWLSYLTFQKYSCELLIVTEFHGLDFTCNSSK
PLPGACLVTHGSQIIDEGYPGALSRYTLDFVLLYAFLPALLLLGMISFKIRDKLVRH
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaacagattttattcgatgcagcccgtggaaccagagaacgggaccaaagtgagagag
tccttcaagtttgtgtcggaagtgaagagggatgtatggagggacagtggagaggagcga
tcagagcccttttgttgtctgagtgtcagcaagatctcctacacagtcagtgagcgtgtg
ggtccttggtgggacttaccctcctacaggaagcgctggactcgtcagatcctcaatgat
gtctccttccacgtagacagtgggcagatcatgggtatactgggcaattcagggtcagga
aagactacattattggatgccatctcagggaggattggaaactgtggtacactgttgggt
gaggtctttgttaacggcaggaatctgaagagagaggagtatcaggactgtttctcctat
gtactgcagagcgataacttgttgagttatctgacagtggaggagactctgacatacaca
gcccagctggctctgcggaaacactcggccgaagccatcaagaaaaaggtgtcagcagtg
atggctgagctgagtctgagccacgttgcccacagtgttattggaggtcgtgttttccca
gggatctctggaggcgagaggaggagggtctccatcgccagccagctacttcaggaccca
cgggtgatcctattggatgagccgaccactggcctggatagcatgaccgccaatcagatt
gtggtgctgctggcagagctggcccggaggaaccgtatcgtcatagtaaccatccaccaa
ccacgctccgagctcttcagggtgttcagcaggatagctataatgagtcgtggagagctg
gtgttctgtgggcagccagaagagatggtggacttcttcagccaatgtggatatgagtgt
ccggagtactgcaacccctttgacatctatgttgacttcacctcggtggacacgcgcagc
agtgagagggaagcagccacgttcagtcgcatgcatgagatcacttcatcctatcagagg
tctgccatctaccagagcatgctgggaaaaatagagcagagcctgcagcgggaagagaag
ccagccatcccctttaagagcaaagagtcgcccagtggtgcagccaaacttgaagttctg
ctcaggcggactgcaagaaacctgtccagagacaggatgggcgttctgatgcgtctgtcc
cagaacctgatctacggtctcttcgtggccttcttcgtcatgcatttagacaacgatgtt
gccaagggtgcagtgcaggaccgcatcggcatcatctatcagagcgttggtgcttcgccc
tacactggcatgctgaacgctgtagctctcttcccggcgttgcgggccatcagtgatcag
gagagtcaggatggtctgtacagtaaatggcaaatgttcttggcctacatcttccacatc
ctgcccttcagcatcctgagtgtgtttatcttcacctccttcctttactggacagtgggg
atgcatcctgagaccttgcgtttcctgtgtttcacagctgtagtcctggtgccacatatt
ataggtgagttgctgactgtggtgttattaggagtggtccaagaccctaacatggtcaac
actggtgtggctctgctgaatattgcagggatcttagtggggtctggcttcctaagaagc
acccagcagatgccagtggtcttccagtggctcagctacctgacttttcagaagtacagc
tgtgagctgctcatagtcacggagttccacggacttgactttacatgcaatagttccaaa
cctttgccaggagcctgtctggtcactcatggcagtcagatcattgacgaaggctatcct
ggcgctttgtcccgatacacgctagactttgttctcctctacgccttcctccctgccctc
ctgttgctgggcatgatcagcttcaagatcagagacaagcttgtacgtcactga
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