KEGG   Lates calcarifer (barramundi perch): 108897450
Entry
108897450         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: muskelin
  KO
K23337  muskelin
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108897450
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   CTLH complex
    108897450
SSDB
Motif
Pfam: Muskelin_N Beta-prop_ATRN-LZTR1 Kelch_KLHDC2_KLHL20_DRC7 Kelch_3 Kelch_1 Kelch_6 Kelch_4 Kelch_5 Kelch_2 F5_F8_type_C Sad1_UNC F5_F8_type_C_2
Other DBs
NCBI-GeneID: 108897450
NCBI-ProteinID: XP_018552591
UniProt: A0AAJ7VGH1
LinkDB
Position
LG18:16779662..16810181
AA seq 722 aa
MMEELSWNILVDKPNDQSSRWSSESNYPPQFLILKMERPAIVQSITFGKYEKTHVCNLKK
FKVFGGMSEENMTELLSSGLKNDYNKETFTLKHKIDEQMFPCRFVKIVPLMSWGPSFNFS
IWYIELHGIEDPDVVQPCLNWYSKYREQEAIRLCLKHFRQHNYTEAFESLQKKTRIALEH
PMLTHLHDRLVLQGDFDACEELIDKAVRDGLFNQYISQQEYKPRWSQIIPKCNKGTTAQE
INRDDMNGDGDDNRPGMRGGHQMVIDVQTETVYLFGGWDGTQDLADFWAYSVQENQWACI
SRDTEKESGPSARSCHKMCIDSQRRQIYTLGRYLDSSVRNSKSLKSDFYRYDIDANTWTL
LSEDTSADGGPKLVFDHQMCMDSEKHMIYTFGGRILTCNGSVEDSRTSEPQFSGLYAYHC
QAGTWSLLREDSCNAGPEDVQSRIGHCMLFHTRNRCLYVFGGQRSKTYLNDFFSYDVDGD
HVEIISDGTKKDSGMVPMTGFTQRATIDPELNEIHVLSGLSKDKDKREENVRNSFWIYDI
ARNNWSCVYKNDQAVKENPSKALQEEEPCPRFAHQLVYDEMHKVHYLFGGNPGKSCSPKM
RLDDFWSLKLCRPSKEYLLRHCRYLIRKYRFEEKAQSEPLSALKYLQNDLSLTVDHTDPD
ETKEFQLLPSALFKSSSDFIPLGFSDVDQTYAQRTQLFDTLVNFFPDSMTPPKGNLVDLI
TL
NT seq 2169 nt   +upstreamnt  +downstreamnt
atgatggaagaactgtcttggaacatcttggtggacaaacctaatgatcagtcttccagg
tggtcttctgagagcaactaccctccacagttcttaatcttgaaaatggagaggccggca
attgttcagagcatcacctttgggaaatatgagaagactcatgtctgcaacctgaagaag
tttaaagtgtttggtgggatgagtgaagagaacatgacagagctcttgtccagtggcctt
aagaatgactacaacaaggaaacgttcaccttaaagcacaagattgacgagcagatgttt
ccctgcagatttgtcaaaatagtgcctctgatgtcttggggtcctagttttaacttcagc
atctggtacattgagctgcatggtattgaagatcctgatgtggtgcagccgtgccttaac
tggtatagcaagtatagagaacaggaagccatccgcctttgtctcaagcacttccggcag
cataactacacagaggcctttgagtcgctgcagaagaagactcggatagcactagagcac
cccatgctcacccacctgcacgaccggctggtgctgcaaggagacttcgatgcttgtgag
gagctcatagacaaagctgtaagagatggtttgtttaaccagtatatcagccagcaggag
tacaagcccaggtggagtcagatcatcccgaaatgcaacaaaggtaccactgcccaagaa
atcaaccgagatgacatgaacggcgacggcgacgacaacaggccagggatgagaggagga
catcaaatggtcattgacgtccagactgagactgtgtatctgtttgggggctgggacggt
acacaggacctggctgacttttgggcttacagtgttcaggagaaccagtgggcctgcatc
tccagagacactgagaaagagagtggtccgagtgctcgttcctgccacaagatgtgcatc
gactctcagcggcgccaaatctacacactgggccggtacctagactccagcgtgaggaac
agcaagtctctaaagagcgacttctaccgctacgacatcgacgccaacacctggacgcta
ctcagtgaggacacatcagctgacggaggcccgaagttggtgtttgaccaccagatgtgc
atggactcagagaagcacatgatctacacgtttggaggtcggatcctgacatgtaacggc
agcgtggaggacagtcggacgtcagagcctcagttcagtggcctgtatgcctaccactgc
caggccggaacgtggagcctcctgcgggaagattcctgcaatgccgggccagaggacgtt
cagtcccgcattggacactgcatgctcttccacactagaaaccgctgtctgtatgtcttt
ggaggtcagaggtcaaagacgtatctcaatgatttctttagctacgatgtggatggagac
cacgtggagatcatatctgatggcaccaagaaggactctggcatggtgccaatgacgggc
tttacccagagagccaccatcgatcccgagctcaatgagatccacgtgctgtcaggcctc
agcaaagacaaggacaaacgggaggagaacgtccgcaactccttctggatctatgacatc
gcccgcaacaactggtcatgtgtgtataagaacgatcaggcagtaaaagaaaacccgagt
aaggctctgcaggaggaggagccgtgtccacgcttcgcacaccagctggtgtatgatgag
atgcacaaggtgcattacctgtttggtggaaacccagggaagtcttgttctcccaagatg
cgtctggacgacttctggtctctcaaactgtgtcggccctctaaggagtacctgctccgt
cactgcagatacctcatcaggaaatacaggtttgaagagaaagcccagtcagagccactg
agtgcattgaagtaccttcagaatgatctgtcactcactgtggaccacacagatcccgat
gagaccaaagagtttcagctcctgccctcagctctcttcaagtccagctctgacttcatc
cctttgggtttctcagatgtagaccagacgtacgctcagcggacacagctcttcgacaca
ctcgtcaacttcttcccagacagtatgactccgcccaagggcaacctggtagacctcatc
accctctag

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