Lates calcarifer (barramundi perch): 108897450
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Entry
108897450 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: muskelin
KO
K23337
muskelin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108897450
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
108897450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Muskelin_N
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
Kelch_3
Kelch_1
Kelch_6
Kelch_4
Kelch_5
Kelch_2
F5_F8_type_C
Sad1_UNC
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
108897450
NCBI-ProteinID:
XP_018552591
UniProt:
A0AAJ7VGH1
LinkDB
All DBs
Position
LG18:16779662..16810181
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AA seq
722 aa
AA seq
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MMEELSWNILVDKPNDQSSRWSSESNYPPQFLILKMERPAIVQSITFGKYEKTHVCNLKK
FKVFGGMSEENMTELLSSGLKNDYNKETFTLKHKIDEQMFPCRFVKIVPLMSWGPSFNFS
IWYIELHGIEDPDVVQPCLNWYSKYREQEAIRLCLKHFRQHNYTEAFESLQKKTRIALEH
PMLTHLHDRLVLQGDFDACEELIDKAVRDGLFNQYISQQEYKPRWSQIIPKCNKGTTAQE
INRDDMNGDGDDNRPGMRGGHQMVIDVQTETVYLFGGWDGTQDLADFWAYSVQENQWACI
SRDTEKESGPSARSCHKMCIDSQRRQIYTLGRYLDSSVRNSKSLKSDFYRYDIDANTWTL
LSEDTSADGGPKLVFDHQMCMDSEKHMIYTFGGRILTCNGSVEDSRTSEPQFSGLYAYHC
QAGTWSLLREDSCNAGPEDVQSRIGHCMLFHTRNRCLYVFGGQRSKTYLNDFFSYDVDGD
HVEIISDGTKKDSGMVPMTGFTQRATIDPELNEIHVLSGLSKDKDKREENVRNSFWIYDI
ARNNWSCVYKNDQAVKENPSKALQEEEPCPRFAHQLVYDEMHKVHYLFGGNPGKSCSPKM
RLDDFWSLKLCRPSKEYLLRHCRYLIRKYRFEEKAQSEPLSALKYLQNDLSLTVDHTDPD
ETKEFQLLPSALFKSSSDFIPLGFSDVDQTYAQRTQLFDTLVNFFPDSMTPPKGNLVDLI
TL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagaactgtcttggaacatcttggtggacaaacctaatgatcagtcttccagg
tggtcttctgagagcaactaccctccacagttcttaatcttgaaaatggagaggccggca
attgttcagagcatcacctttgggaaatatgagaagactcatgtctgcaacctgaagaag
tttaaagtgtttggtgggatgagtgaagagaacatgacagagctcttgtccagtggcctt
aagaatgactacaacaaggaaacgttcaccttaaagcacaagattgacgagcagatgttt
ccctgcagatttgtcaaaatagtgcctctgatgtcttggggtcctagttttaacttcagc
atctggtacattgagctgcatggtattgaagatcctgatgtggtgcagccgtgccttaac
tggtatagcaagtatagagaacaggaagccatccgcctttgtctcaagcacttccggcag
cataactacacagaggcctttgagtcgctgcagaagaagactcggatagcactagagcac
cccatgctcacccacctgcacgaccggctggtgctgcaaggagacttcgatgcttgtgag
gagctcatagacaaagctgtaagagatggtttgtttaaccagtatatcagccagcaggag
tacaagcccaggtggagtcagatcatcccgaaatgcaacaaaggtaccactgcccaagaa
atcaaccgagatgacatgaacggcgacggcgacgacaacaggccagggatgagaggagga
catcaaatggtcattgacgtccagactgagactgtgtatctgtttgggggctgggacggt
acacaggacctggctgacttttgggcttacagtgttcaggagaaccagtgggcctgcatc
tccagagacactgagaaagagagtggtccgagtgctcgttcctgccacaagatgtgcatc
gactctcagcggcgccaaatctacacactgggccggtacctagactccagcgtgaggaac
agcaagtctctaaagagcgacttctaccgctacgacatcgacgccaacacctggacgcta
ctcagtgaggacacatcagctgacggaggcccgaagttggtgtttgaccaccagatgtgc
atggactcagagaagcacatgatctacacgtttggaggtcggatcctgacatgtaacggc
agcgtggaggacagtcggacgtcagagcctcagttcagtggcctgtatgcctaccactgc
caggccggaacgtggagcctcctgcgggaagattcctgcaatgccgggccagaggacgtt
cagtcccgcattggacactgcatgctcttccacactagaaaccgctgtctgtatgtcttt
ggaggtcagaggtcaaagacgtatctcaatgatttctttagctacgatgtggatggagac
cacgtggagatcatatctgatggcaccaagaaggactctggcatggtgccaatgacgggc
tttacccagagagccaccatcgatcccgagctcaatgagatccacgtgctgtcaggcctc
agcaaagacaaggacaaacgggaggagaacgtccgcaactccttctggatctatgacatc
gcccgcaacaactggtcatgtgtgtataagaacgatcaggcagtaaaagaaaacccgagt
aaggctctgcaggaggaggagccgtgtccacgcttcgcacaccagctggtgtatgatgag
atgcacaaggtgcattacctgtttggtggaaacccagggaagtcttgttctcccaagatg
cgtctggacgacttctggtctctcaaactgtgtcggccctctaaggagtacctgctccgt
cactgcagatacctcatcaggaaatacaggtttgaagagaaagcccagtcagagccactg
agtgcattgaagtaccttcagaatgatctgtcactcactgtggaccacacagatcccgat
gagaccaaagagtttcagctcctgccctcagctctcttcaagtccagctctgacttcatc
cctttgggtttctcagatgtagaccagacgtacgctcagcggacacagctcttcgacaca
ctcgtcaacttcttcccagacagtatgactccgcccaagggcaacctggtagacctcatc
accctctag
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