Lates calcarifer (barramundi perch): 108897468
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Entry
108897468 CDS
T04895
Name
(RefSeq) conserved oligomeric Golgi complex subunit 5
KO
K20292
conserved oligomeric Golgi complex subunit 5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108897468
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
108897468
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COG5_C
COG5_N
VPS51_Exo84_N
COG2
EXOC6_Sec15_N
Exonuc_VII_L
DUF3135
Fib_alpha
DUF6674
HrpB7
Vps54_N
Motif
Other DBs
NCBI-GeneID:
108897468
NCBI-ProteinID:
XP_050933555
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Position
LG18:17610339..17660894
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AA seq
815 aa
AA seq
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MEDRREASTNSLLKDECYTDFLAEDFDVKTYTAQAIHHAVIAEQLAKLAQGISQLDKELH
SQVVARHEDLLAQATGIESLEGVLQMMQTRISALQAAVDRIRTKIVDPYNKIVARITQLA
RLQVACDLLRRIIRILYLSKRLQGQLQGGSREITKAAQSLNELDYLSQGVDLSGIEVIEN
DLLLISRARLEVENQAKRLLEQGMEIQNPTQVGTALQVFYNLGSLRETIGSVVGGYRTTI
QDNITSALDIKGLTQPTNPRGAPGRAVLPTPGNTAAFRAALWTNLEKLMDQICAACRQVQ
HLQKVLMKKRDPVSHVCFIDEISKDGQPDILYNFWTDVTNTLSEEFHRATEASFFLKQAF
EGEYPKLLRLYNELWRRLQQYSTSLQGALTSSGGMDASLDITATETDSQDLFTHGKQDYS
PEKALKDSLQPYEAAYLSKSLSRLFDPINLVFPMGGRNPPSNDELDSIIKTISRHLNVAS
VDPDLSLAVAKNAAKTVQLFCVKSEQLLCTQGDASQVIGPLTEGQRRNVAVVNSLYRLQQ
AVAKIISGLGFCPPAAAEALSSSLEGVQALMSSAVQPLLQSVSDSIEAIIITLHQEDFSG
PLSTPDKPDVPCSLYMKELQGFISRVMTDYFRHIQCVDFIYESTESIAQKAIELFIRHAS
LLRPLGEGGKMRLAADFAQMEMAVGPLCRRVSDLGKPYRMLRSFRPLLFQTSELIASSPV
VGDLIPYSTLLHFLFTRAPSELKSPHQRAEWSIARYSQWLDDHPSERDRLTLIRGALEAY
VQSVRARQGKEFAPIYPIMLQLLQRATSGSQEVRA
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaggagagaagcttccacgaattcacttctgaaagatgagtgttacactgat
ttcctggcagaggatttcgatgtgaagacatacactgcacaagctatacaccatgctgtt
atcgctgagcagctggccaagctggcgcagggcatcagtcagctggacaaagagctgcac
agccaggttgtggccagacatgaagacttattggctcaggcaaccgggatagagtctctt
gaaggggtccttcagatgatgcagacaaggatcagtgctctgcaggcagctgttgacagg
ataaggacgaagattgttgacccatacaacaagattgtggccaggatcactcagcttgcc
agactgcaggtggcctgtgacctgctgcggaggatcattcgcatcttgtacctgagcaag
aggctccagggtcagctccaggggggcagtagagagatcaccaaggctgctcagagcctc
aacgaactagactatctgtcacaaggtgtggatctctccggcattgaggtgattgaaaac
gacttgctgctgatcagcagagccagactggaggtggagaaccaagccaagagactgctg
gagcagggcatggagatccagaatccgactcaggttggcacggccctgcaggtcttctat
aacctgggaagtttaagagagaccattggcagcgtggtggggggttatcgcaccaccata
caggacaacatcacaagcgctctggacatcaagggcctgacacagccgaccaaccccaga
ggtgctccaggcagagcagtgctgccgacgccagggaacacggcagctttccgtgccgct
ctgtggaccaacctggagaaactgatggaccagatatgtgccgcgtgcagacaggtgcag
catctccagaaggttctgatgaagaagagagaccctgtcagtcatgtgtgcttcatagat
gagatcagtaaggatggtcagcctgatatcctctataacttctggactgatgtaaccaac
acactgagtgaggagtttcacagagctacggaagcctcgttctttctgaagcaggcattt
gaaggcgagtatcctaaactgctgcgactgtacaatgaactgtggcgccgcctgcagcag
tatagcaccagtctgcagggagctctgacgagcagcggaggcatggacgcatctctggac
atcacagccacagagacggacagccaggacctgttcacgcatggcaaacaggactacagc
ccagagaaggctctgaaggactctctgcagccgtacgaggcagcctacctctccaagtcc
ctctctcgcctgtttgatccgatcaacctcgtgttccctatgggcggccgcaacccaccc
tccaatgatgagctggacagcatcatcaagaccatcagcaggcacctgaatgtagcatcg
gtagatccagatctctccctggctgtggccaagaatgctgccaagaccgtccaactcttc
tgcgtcaagtctgaacagctgttgtgtactcagggtgatgccagtcaggtgattggtcca
ttaacagagggccagaggaggaatgttgctgttgtcaactccctctaccgtctgcagcag
gctgtcgccaagattatttccggtttgggtttttgtccaccagctgctgcagaggccctg
tcttcttctttggagggagtgcaggccctgatgagcagcgcagtgcagcctctcctgcag
tcagtgagcgactccatagaggctatcatcatcactctacaccaggaagacttttcaggg
cctctgtctacccccgataagcccgatgttccgtgctccctctacatgaaggagctgcag
ggcttcatctccagagtgatgaccgactacttcagacacatccagtgcgtggacttcatc
tacgaaagcacagagtccattgctcagaaagccatcgagctgttcatccgccacgccagc
ctgctgcgcccgctgggagagggcggcaagatgagactggctgctgactttgcgcagatg
gagatggcagtgggtcctctgtgcaggagagtgtctgatttggggaaaccttacagaatg
ctgcgctccttcaggccgctgctgtttcagaccagcgagttgatagccagcagtccagtt
gtgggtgacctgatcccctacagtaccctgctacacttcctcttcaccagagccccctct
gagctcaagtcacctcaccagagagcagagtggtccattgcccgttactctcagtggctg
gatgatcatccctcagagagagaccggcttaccctcatcaggggcgctctggaggcctac
gtgcagtcagtgagggctcggcaggggaaggagttcgcccccatctatcccatcatgctc
cagctgttacagagggccaccagtggttcacaggaggttagagcctga
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