Lates calcarifer (barramundi perch): 108897483
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Entry
108897483 CDS
T04895
Name
(RefSeq) RAD50-interacting protein 1
KO
K20474
RAD50-interacting protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108897483
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
108897483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Yuri_gagarin
Muted
Motif
Other DBs
NCBI-GeneID:
108897483
NCBI-ProteinID:
XP_018552653
UniProt:
A0A4W6EMJ5
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All DBs
Position
LG18:complement(16645911..16655491)
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AA seq
793 aa
AA seq
DB search
MAAPTAVDKTMSKMTDNFVYPVYTTNQGSELESGELQDFVVDFLEKEIGSDLKSLKNVGK
LLEELREENSVLEEQVLSVSSSVPPKVSSALSAAEEARCSMEDLQQRERLISNKLHQHLQ
GAQPWMDNLSQTLNQVDTIERHMKYLCCLQHIEELSAAVQQCLMTSSVWEAIRAVDSMAA
LDAGLNQSGCTHLQNFLRETLHFWHKIIKDRLASDFEKVLTQLHWPIISPPTQSLTPTAN
CQEISSQLELLVTQLLALQTSDDLISQRALPSTQGAPSTQPVSSATPASQGPPICLPIQI
MLQPLSKRFRYHFYGNRQTNSLSKPEWYLTQVLMWMGNSSTFMEEKIQPILERAGATISA
RVELCRGLLSLVQEKVASDASRLLYDDGLFCHLVEEVLQFEKELRTNQSYPAVLPGLLHL
LLEDSILQKWLTVERKMAVEKMDAMLSAEGAWSSQYKDISDMDELKAPDCAETFMTLLQV
ITERYRALPCPSAQLKFLGLQRELVDDFRIRLTQVMKEESRCPLGARYCAILNAVNYIST
ILVDWGDNVFFLQLQQAAVSLGEEVVLGDLGVMEVGRLASLEGSLFEGLLALLDRLKGDM
MGRLLEWTMREITEKARPYSQDRWLSLPSQHDQSTMSLSSSACPMMLCVRDRLLNLHQVL
SLSLFQLAWQGLAERLDNFLYQDVILCNHFSDGGAAQLQFDMTRNLFPLFGHYCKRPENF
FKHVKEACIILCLNVGSAILLRNLLKESEEETKDLAGAGDPPPESALNELGVYCLAPCDV
LILLKLRASLPGQ
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccacagcagtagacaaaactatgagcaaaatgactgacaattttgtatac
cccgtttatacaactaaccaaggtagcgaattagagtcgggagagcttcaggattttgtg
gtggatttcctggagaaggagataggcagcgacctgaaatccctgaagaatgttggcaaa
ctgctggaagagctgagagaggaaaacagcgtcctggaggaacaggttctgagtgtgtcc
agttctgtgccccctaaagtgtcttcagctctgtctgctgctgaggaggctagatgttcc
atggaggacctgcagcagagagagcgacttatctcgaacaagctgcaccagcacctgcag
ggggcccagccttggatggataatcttagccaaacgcttaaccaagtcgacaccatagag
agacacatgaaatacctatgctgccttcaacacatagaggaactcagtgctgcagtccag
cagtgtctgatgaccagcagtgtctgggaggccataagggcagtggacagcatggctgcg
ctggatgctggactaaaccagtccggatgtactcacctccagaacttcctcagagaaaca
cttcacttctggcacaagattatcaaagacagactggccagtgattttgagaaagtattg
actcagctccattggccgatcatctcccctcctactcagtcacttacacccactgccaat
tgtcaggagatcagcagccagctggagttgcttgtcacacagctactcgccctgcagacc
tctgatgacctcatatctcagagggctttgccctctactcagggtgcaccctccacccag
cctgtctcttcagctacacccgcatcccaaggtcctccaatctgtctgcccatccagatc
atgctgcagccgctcagcaaaagattcagataccacttctatgggaaccgacagacaaac
tccctcagcaagcccgagtggtacctcacacaggtcctgatgtggatggggaacagctcg
accttcatggaggaaaagatccagcctatccttgagcgagctggggccaccatcagtgcc
agggtggagctatgtcgaggcttgttgtctttagtccaggagaaagtggccagcgacgcc
tctcggctgctgtatgacgatgggctcttctgtcacctggtggaggaggtgctgcagttt
gagaaggagctgcgaacaaaccagtcgtacccagcagtgctgcctggtctgcttcacctc
ctgcttgaggactccatacttcagaagtggcttactgtggaaaggaagatggcagtggag
aagatggatgccatgctgtcggctgagggagcgtggagctctcagtacaaagatatcagt
gatatggatgagctgaaggctccagactgtgctgagactttcatgactctgctacaggtc
atcactgagcggtaccgggctttaccctgtccctcggctcaactgaagtttctagggcta
cagagagaactggtggatgatttccgcatacgactcactcaggtgatgaaagaggagtct
cgatgcccgctcggtgcacgttactgtgccatccttaatgctgtcaactacatttccacc
atcctggtagactggggagacaatgtgtttttcctccagcttcagcaggcagcggtttca
cttggtgaggaagtagtactgggagaccttggggtgatggaggtgggccgtctggcttct
ctggagggctctttattcgaaggcctgctggcattgctggatcgactgaaaggggatatg
atgggaagactgctggagtggaccatgagagaaatcacagaaaaagccagaccatatagc
caagacaggtggttgtccttaccgtcccagcacgaccagtccaccatgtccctgtccagt
tcagcatgtcccatgatgctgtgtgtgagggacagactgttgaacctgcatcaggtcctg
agtctttctctgttccaactagcctggcagggtctggcggagagacttgacaactttctc
taccaggatgtgatcctatgcaatcatttcagtgatggcggggcagctcagcttcagttc
gacatgaccagaaacctatttcctctgtttggtcactactgcaaaagacctgagaacttt
tttaagcatgttaaggaggcatgtatcatcttgtgtctgaatgttggctctgctattctg
ctaaggaatctccttaaagagtcagaggaggagacaaaagatttggcaggtgcaggggat
cctccacccgagtctgcgctgaacgagttaggagtttactgcttagcaccctgtgatgtg
ctgattctccttaagctcagagcctccttgcctggacagtga
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