Lates calcarifer (barramundi perch): 108897513
Help
Entry
108897513 CDS
T04895
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108897513
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108897513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
C1q
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
108897513
NCBI-ProteinID:
XP_018552709
UniProt:
A0A4W6EUA3
LinkDB
All DBs
Position
LG18:17417098..17432793
Genome browser
AA seq
922 aa
AA seq
DB search
MVQLSPSPTLDDTPPPERSEEGSERQDDPVMTGSPKVGSPGGLNSLQFSLEVTTAYHGYD
TYIEDGLICLKHKIRNLEKKKLKLEDYKKRLNQGHVLNKDQMAAVEKYEEVLHNLEFARE
LHKTLDGLTQNLLRAQKKAVKKDQVAKVEVERRRLSTVLQVQHLLHSLQQEHIRRDVLVG
HNQAPHIPAQQLHSLNQLATLLGVKRDNRLSLSEQMEQAALVYLDLLEGKDKPVAGSTFK
LLKEELTRLLNCKYFSCLPPPPNKTPELLLSSTSHSTISKSNPNEVSKKEFFNRLYLTDM
ETPPAQSWKEDFQAMREREPPDCWDMEFPDRPTSPHTAVHKPWRGAATLIPKVPAATKKQ
SADCKQRKERKAKGEPNSKLAVHMDMPVEVFNSPSTLPKDPILRKQHLEDLMTKIHGSFS
FMQDSLLDGESSPTDGHSGLKRRPSGSPSPLAETDLRSPVDVLPKAMHSTPLPTRLMERK
ASLTSGDQCLETCDLELSSKDLPHEPLQLADRKAFPSPPLYRRESTISVNLEEKSRPRTP
VTESGKQSPCNGVGSCTSTPPQGQSFSTPPTRRTLTSAQFQNIQSVFKVNTSLPQNGELN
YKPDSTVFSEPRYSTASTQTPPEFAPSEDEPQPVYQSDYTVGSGGQIFLSPGQSGGSMAR
PGQSYYTRGSVRGMARGGKGLAQTFRSSGWHRGGSYIPQTHLRDSGPLLYAARDSGYQHS
FRRGGGRHNSSAAWSDSSQVSSPDREGAFTIVDSGHGDSLSVSTVEVPLTPHAHHHTALL
PMQLYPLSQPLRVAFTASRTANFAPGNLDQPIVFDQLHSNLGEMYDTHIGRFTCPVNGTY
VFIFHILKLAINVPLYINLMRNEDVMVSAYANDGAPDHETASNHAILPLFQGDQVWLRLH
RGAIYGSTWKYSTFSGFLLYQD
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccttcccccaccctggatgatacccccccacctgagcgctcagag
gagggcagcgaaaggcaggatgacccggtgatgactggtagcccgaaggtgggctcgccc
ggaggcctgaactccctgcagttcagcctggaggtcaccaccgcctaccatggctatgac
acctacatagaagatggcctcatctgcctcaaacacaaaatccgcaacttggagaaaaag
aagctgaaactggaagactacaagaagaggctgaaccaaggccatgtactaaacaaggat
cagatggcggctgtggaaaagtacgaggaggtgttgcacaacctggaatttgctcgggag
ctacacaaaaccctggatggcttgactcagaatctgctgagagcccagaagaaggcagtg
aaaaaggaccaggtggcgaaggtggaggtggagaggaggcgtctgagcacggtgctccag
gtacagcatctcctccacagcctgcagcaggagcacatcaggagagacgtgctagtcggg
cacaaccaggcaccccacatcccagcccaacagctgcacagcttgaatcagctcgccacg
ctgctgggggtcaagagggacaacagactgagtttatcagagcagatggagcaggcggct
ctggtgtacttggacctgctggaggggaaagacaagccagtggctggatcaacgtttaag
ttgttgaaagaggagctcaccagacttttaaactgcaagtacttcagttgtcttccgcct
ccacccaacaagactccagagctgttactgagctcgaccagccacagcaccatatcaaag
tcaaacccaaatgaagtttcgaagaaagagtttttcaacagactgtacctgactgacatg
gagacccctcctgctcagagctggaaggaggacttccaggccatgagagagcgggaaccc
cctgactgctgggatatggagttcccagacagacccacctcaccccatactgcagtccac
aaaccatggaggggagccgccactttgatccccaaagtcccagccgctaccaagaaacag
tctgctgactgcaaacagagaaaagagaggaaagccaaaggggaaccaaactctaagttg
gcagttcacatggacatgcctgtggaggttttcaactctccatctaccttacccaaagac
cccatcctgagaaagcagcacctggaggacctcatgacaaagatccacggctccttcagt
ttcatgcaggactctcttcttgatggtgagagctcccccactgatggtcactctggactg
aagagacgaccatctggatctccctctcctctggctgagacagacttgagaagcccagtt
gatgtcctgcccaaagcaatgcattccaccccactgcctaccaggctcatggagcgcaaa
gccagtctgaccagcggggatcagtgcctggagacctgtgacctggagctttcctcaaag
gacctacctcatgagccactgcagctggctgatagaaaggcatttccctcaccgccgctg
taccgcagggagtcgaccatctcggtcaacctggaggagaagagccgtcctcgtacgccg
gtgactgagtcagggaagcagtccccgtgtaatggggtgggatcttgcacctcaaccccc
ccccagggacagtctttctccacaccccccaccaggagaactctcacctctgcacagttt
cagaacatccagtcagtcttcaaggtgaatacgtccttaccccagaatggggaactgaac
tacaaaccagactccacagttttctctgagcccaggtacagtactgccagtacccaaaca
ccacctgagtttgctccctcagaagacgaaccacagcctgtgtaccagtcagattatacg
gtggggagtggtgggcagatattcctttcccctggccagtcaggcggaagcatggcccga
cctggccagtcgtactacaccagaggatctgtgagaggtatggcacgtggcggcaaggga
ctggcacaaacctttcgctcttctggttggcatcgaggaggatcctacatcccccagact
catctcagggactctggccctctcctctatgctgctagagactctggataccaacacagc
tttagacgaggaggagggaggcataactccagtgcagcctggagtgattcttcccaggtg
agtagcccagaccgggagggagccttcacaattgtggactcggggcatggcgattcgctg
tcggtctccacggtggaggtcccgctcactccccacgcccaccaccacactgccctgctt
cccatgcaactctacccactgtcccagcctctgcgagtggcctttaccgcctctcgcact
gccaacttcgccccgggcaatctggaccaacccatcgtgttcgaccagctgcacagcaac
ctgggcgagatgtacgacacccatatcggccgcttcacctgccccgtcaacggaacctac
gtcttcatcttccacatcctgaagctcgccatcaacgtgccactctacatcaacctcatg
cgcaatgaggacgtgatggtgtcagcgtacgccaatgatggagccccagaccacgagacg
gccagcaaccacgccatcctgcctctcttccagggagaccaggtgtggctccggttgcat
cgtggtgccatctatggcagcacctggaagtacagcaccttctcgggcttcctgctgtac
caggactga
DBGET
integrated database retrieval system
