Lates calcarifer (barramundi perch): 108897528
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Entry
108897528 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: glycogen [starch] synthase, liver-like
KO
K00693
glycogen synthase [EC:
2.4.1.11
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00500
Starch and sucrose metabolism
lcf01100
Metabolic pathways
lcf04910
Insulin signaling pathway
Module
lcf_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108897528
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108897528
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108897528
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.11 glycogen(starch) synthase
108897528
Glycosyltransferases [BR:
lcf01003
]
Polysaccharide
Storage polysaccharide
108897528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycogen_syn
Glyco_transf_5
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
GT4-conflict
Motif
Other DBs
NCBI-GeneID:
108897528
NCBI-ProteinID:
XP_050924304
UniProt:
A0AAJ8B0T7
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MPLSRSLSMTSLSGVLPAWEEDELPVEDLLLFEVAWEVTNKVGGIYTVIQTKAKITVDEW
GENYYMMGPYFEQNFKTQVEGCEPPNPAIRKAMDALIHNGCQVHFGRWLIEGSPYVILFD
IGSAAWNLDRWKGDLWQTCSIGLPYHDREANDSLILGSLIAWFFKELTDNLGDKPNVIGH
FHEWQAGAGLILSRSRKIPMATVFTTHATLLGRYLCAGNADFYNNLDKFNIDKEAGERQI
YHRYCLERAAVHCAHVFTTVSQITAVEANHMLHRKPDVVTPNGLNVKKFSAMHEFQNLHS
TSKTRIQEFVRGHFYGHLDFNLEKTLFFFIAGRYEFSNKGADIFLESLSRLNYLLRVHRN
DVTVVVFFIMPAKTNNFNVESLKGQAVRKQLWDTAHTVKEKFGKKLYDALLTGTIPDMNS
ILDRDDFTIMKRAIYATQRHSLPPVTTHNMLDDSTDPILSNVRRIGLFNSRNDRVKIIFH
PEFLSSTSPLLPMDYEDFVRGCNLGVFPSYYEPWGYTPGECTVMGIPSVTTNLSGFGCFM
EEHVSDPAAYGIYIVDRRFRSPEESCNQLTQFMFSFCQQSRRQRIIQRNRTERLSDLLDW
RYLGRFYIHARHLALSRAFPEKFKMDPMAPLKTEGFRYPRPYSVXPSPSASSTHPHHSDV
EDDDDESYDEDEEAERDRLNIKAPFAPGAMPEGKKKQPGESGN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgtctcgttccttgtccatgacatccctgagtggggtgctgccggcctgggag
gaggacgagctgcctgtggaggacctgctgctctttgaggtggcctgggaggtgaccaac
aaagttggaggaatctacacagtgattcaaaccaaggctaagatcacagtggatgaatgg
ggggagaactactacatgatggggccgtactttgagcagaacttcaagactcaggtggag
ggctgtgagccgcctaacccagccatcaggaaggccatggacgctctcatccacaacggc
tgccaggttcattttggccgctggctaatcgagggcagcccctacgtgatcctgttcgac
attggctctgctgcctggaacctggaccggtggaagggggacctgtggcagacctgcagt
atcggcctgccctaccacgacagagaggccaacgactcgctcatcctgggctccttgatc
gcctggttcttcaaagagctaacagacaaccttggagacaagccaaatgtcattggtcat
ttccatgagtggcaggcaggggctgggcttattctctctcgctctcgcaagattcccatg
gcaacagtattcacaacacatgccaccctgctgggacgatacctgtgtgctgggaatgca
gacttttataacaatctggacaagttcaacattgacaaggaggcaggtgagagacagatc
taccatcgatactgtctggagagagcggcggtccactgtgctcatgtcttcaccacagtc
tcccagatcacagcagtggaggccaaccacatgctgcacaggaagccagatgtggtgacc
ccaaatggactaaatgtgaagaagttctcagccatgcatgagtttcaaaatctacactcc
accagcaagacccgcatccaagagtttgtcagaggacacttttatggtcatctggacttc
aacctggagaaaacccttttcttcttcatcgccggacgctatgagttctccaacaaggga
gcggatattttccttgaatcactatccagactcaattacctgctgcgggtccacagaaat
gatgtaaccgtggtggttttcttcattatgcctgccaaaaccaacaacttcaacgtggag
tcactgaaggggcaggcagtacgcaaacagctctgggatacagctcacacagtgaaggag
aagtttggaaaaaagctgtatgatgctctgttgacagggacaatccctgatatgaattcc
attctggacagagatgacttcactataatgaagagagccatctacgccactcagagacac
agcctgcctccagtgaccactcacaacatgctggacgactcaacggatcccatcctgtcc
aacgtcagacgcatcggcctgttcaactccagaaacgaccgcgtcaagatcatcttccac
cctgagttcttgtcctccaccagtcccctgctgccgatggactatgaagactttgttcgt
ggctgtaaccttggagtgttcccctcctactatgaaccatggggatacacacctggtgaa
tgtactgtgatgggcattcccagcgtgaccaccaacctgtcaggtttcggctgcttcatg
gaggagcatgtctcagaccctgctgcctatggtatctacatcgtggaccggcggttccgt
tcccccgaggagtcctgtaaccagctgacccagttcatgttcagtttctgtcagcagtca
cggcgtcagcgcatcatccaacgaaaccgcacagagaggctgtccgacctgctggactgg
agatacctgggacggttctacatacatgcccgccatcttgcacttagcagagctttccct
gagaagttcaagatggaccccatggcccctctgaagacggagggtttccgttacccccgc
ccctactcggtgnncccctctccctcagcctcctccactcacccccaccacagtgatgtg
gaggatgatgacgacgagtcctatgatgaagatgaggaggccgagagggaccggctgaac
atcaaggctccctttgcaccgggtgctatgcctgagggaaagaagaagcaaccgggagaa
tcaggaaactga
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