Lates calcarifer (barramundi perch): 108897543
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Entry
108897543 CDS
T04895
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108897543
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108897543
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108897543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-CCCH_9
zf-ANAPC11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
108897543
NCBI-ProteinID:
XP_018552746
UniProt:
A0A4W6DRP1
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All DBs
Position
LG18:18668134..18687288
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AA seq
431 aa
AA seq
DB search
MAEAAAASTAASGVIGGWTKHVTCRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQKG
NCVFGERCRFEHCKPAKNEELPTPQMLPLPSVSLAGPSDPEPSGPTPGPGAQDWVNAAEF
VPGQPYCGRAEQVKVESSVPLIEEFDSETAQDNKQLRKQLCPYAAVGECRYGINCAYLHG
DVCDMCGLQVLHPTDNNQRSEHTKACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEKAN
PSERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEDKDD
KQKLIQKYKDGMGSKPCRYFDEGRGTCPFGSNCFYKHAFPDGRLEEAQPQRRQTGSNSRN
RNSRRTPLWDIFDERESTDSFDNEDEEMVTFELSEMLLMLLAAGTDDEVTDSEDEWDLFH
EELDDFYEIYL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagcagcgtctacggcagcttcaggagtaataggaggctggaccaaa
cacgtaacctgcagatatttcatgcatggactttgcaaagaaggagacaactgtcgatat
tcccatgatttgaccaacagcaaacctgcagccatgatttgcaagttctttcagaaggga
aactgtgtgtttggggagcgttgcaggtttgaacactgtaaaccagcaaaaaacgaggag
ctgccaaccccccagatgctgccgctgccttctgtctcgctggctggcccgtcagaccca
gaacccagtgggccaacacctggcccaggggcacaagactgggtcaacgctgcagagttc
gtaccaggacagccatactgtggacgggctgaacaagtgaaggtggagagctccgtccct
ctcatcgaggagtttgacagtgagacagcacaggacaacaaacagttgaggaagcagctc
tgtccatacgctgctgttggtgagtgccgctatggaatcaactgtgcctatctccacggt
gacgtgtgtgatatgtgtggcctccaggtgctccaccccactgacaacaaccagcgctcc
gagcacaccaaggcgtgcatcgaggcccatgagaaagacatggagatttcatttgccatc
caacgcagcaaggacatgatgtgcggtgtgtgtatggaggtggtgtttgagaaggccaac
ccaagcgagcgccgttttggcatcctctccaactgcagccactgctactgtctaaaatgc
attcgcaagtggaggagtgccaaacagtttgagagcaaaatcatcaagtcttgcccagag
tgccgaatcacgtccaactttgtcatcccaagcgagtactgggtagaagataaggatgat
aagcagaagctcatccagaaatacaaggatggcatggggagtaaaccgtgtcgatatttt
gacgagggtcgtggaacgtgcccttttggttcaaattgcttctacaaacatgcctttcct
gatggacggctggaggaagctcaaccacagcgacgacagaccggatccaacagcagaaac
cggaactcgaggcgaacaccactgtgggacatcttcgatgagagggaaagcactgattct
ttcgacaatgaggacgaggagatggtgacatttgagctgagcgagatgctcctcatgctg
cttgccgcaggaaccgatgacgaggtgacagattcagaggatgaatgggacttgtttcac
gaggagctggacgatttctatgaaatttacctatag
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