Lates calcarifer (barramundi perch): 108897572
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Entry
108897572 CDS
T04895
Name
(RefSeq) kelch-like protein 42
KO
K27973
kelch-like protein 42
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108897572
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108897572
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_1
Kelch_KLHDC2_KLHL20_DRC7
Kelch_6
Kelch_3
Beta-prop_ATRN-LZTR1
BTB
Kelch_2
Kelch_4
Kelch_5
NANM
BTB_KLHL33
BACK
Motif
Other DBs
NCBI-GeneID:
108897572
NCBI-ProteinID:
XP_018552788
UniProt:
A0A4W6G1R8
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All DBs
Position
LG18:10832428..10838584
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AA seq
470 aa
AA seq
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MSSDQIIAIVMDDKIYEVNKKKLIEKSDYFRALYSSGMRESTEDSVQLQGLSVPGLELVL
EFINTSKVQVVNETLEDLIETASFLQVTSILKLLTSEIRLDNCVELYSLSEVYGTHDLRN
ACLKYMSCYYHPMLRRPEFSSLPSAVRDQVREMRMKGTATLVAIGDFTCLSLDVPDQDEP
WSMLRYGEVEQRWKPLANNLPPDMINVRGYGSAVLDNYLFIVGGYRMTSQEISAVHCYNP
CRNEWNQVAPLNQKRSNFKLLAVQGKLYAVGGQCLGTVECYSPEQDWWTCVSSMPDPLAE
FSACECQGLIYVMGGYTARDRNTNVLRYCPTSDTWTVFRSCPSHIRKQQMLSVEDTIYLV
GGYTHELEAGRRQRRPSQTEDVLTVQSYNVTTGEWIQLKENTSKSGLNLTCTLHNDGIYI
MSRDVSLPTSLEHRVFLKYNIFSDAWEAFRRFPALGQNMLLCSLYLPNML
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgaccagattattgccatcgtcatggatgacaaaatctacgaggtgaataag
aagaagctgatagaaaagagcgactatttccgtgcactgtacagctctggtatgagagag
tccacggaggactcggtgcagctgcaggggctcagcgtccccggcctggagctggtcctg
gagttcatcaacacctccaaagtccaggttgtcaacgagactctggaggacctgattgag
accgcctccttcttgcaggtcacgtccatcctcaaactcttgacctcggagatccgattg
gacaactgcgtggagctgtacagcctctccgaggtttatgggactcatgatctgcgtaat
gcttgcctcaaatacatgagctgctactaccatcccatgctgaggcgacctgagttcagc
agcctcccctctgctgttagagaccaagtcagggagatgcgcatgaaaggcaccgccacc
ctggtggccatcggagacttcacctgtctgtccttggacgtgcctgatcaggatgaaccc
tggtccatgctgaggtacggagaggtggagcagcgctggaaaccactcgccaacaacctg
cctccagatatgatcaacgtcagaggttacggctcagccgtcctcgacaactacctgttc
atagtcggtggttacaggatgacgagtcaggagatctctgctgtgcactgctacaaccct
tgtaggaacgagtggaaccaggtggctccgctcaaccagaaaaggtccaacttcaagctg
ctggcggtacaggggaagctgtacgccgtaggaggtcaatgtctgggcacagtggagtgt
tacagcccggagcaggactggtggacctgcgtgtcctcgatgcccgacccgctggctgag
ttctccgcctgtgaatgccagggattgatctacgtcatgggtggatacaccgcaagagac
aggaacacaaacgtcctccgttactgccccacctctgacacctggacagtgtttcgctcc
tgtccatcacacatccgcaagcagcagatgctctcagtggaggacactatctacctggtg
ggtggctacacccacgagctggaggcgggccggaggcagcgacgtcccagccagacagag
gacgtgctgacggtgcagtcttacaacgtcaccacgggggagtggatccagctgaaggag
aacacgtccaagtcgggcctgaacctgacgtgcacgctgcacaacgacggcatctacatc
atgagtcgcgacgtcagcttgcccaccagcctggagcaccgcgtttttcttaaatacaac
attttctcagacgcctgggaggccttcaggcgcttcccagctctgggacagaacatgctg
ctgtgttcgctttacctccccaacatgctatga
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