Lates calcarifer (barramundi perch): 108897584
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Entry
108897584 CDS
T04895
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108897584
03036 Chromosome and associated proteins [BR:
lcf03036
]
108897584
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108897584
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
108897584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
DUF6730
CHASE6_C
Motif
Other DBs
NCBI-GeneID:
108897584
NCBI-ProteinID:
XP_018552803
UniProt:
A0A4W6G293
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All DBs
Position
LG18:10984408..10988814
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AA seq
356 aa
AA seq
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MDEHKENIHAKDVNVKMSATKEEEKTKSCSRICPAEEPAPLVSPSQSDGDFSHPVYKEIA
LANGHINRMTKEELRIKLAELKLDTRGVKDVMKKRLKSHYKKQKLMQSAAEGGPTDTYYD
YICVVDFEATCEEDNPSDFLHEIIEFPMVLINTHTLEIVDTFQEYVKPELNPQLSDFCVK
LTGITQKMVDEADSFPEVLQRVVDWLQERELGTKYKYAILTDGAWDMSKFLNIQCRISRI
RYPQFAKKWINIRKSYGNFYKVPRTQTKLSTMLQKLGLKYEGRPHSGLDDSRNIARIALR
MLQDGCQLRVNERMHAGQLLSVPSSAPVEGAPPPHGPRKQRVEPDTEACCDSLPLP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacacaaagagaatattcatgccaaggacgtgaatgtgaagatgtcagctaca
aaagaagaggaaaagacaaagtcctgcagcaggatatgccctgccgaagaacctgctcct
ctggtgtccccgtctcagtccgacggtgacttcagtcatccggtttacaaagagatcgct
ttggccaacggacacatcaaccgcatgaccaaggaagagctcagaatcaagttggcagag
ctgaagctcgacacgagaggagtgaaggatgtgatgaagaagaggttgaagagccactat
aagaagcagaagctgatgcagtctgcagctgagggaggacccactgacacctactatgac
tacatctgtgtggtggactttgaagccacttgtgaagaggataatccatcagacttcctc
catgaaatcatagagttccctatggttctcatcaacacacacactttagaaattgtggac
acctttcaggaatacgtaaaacctgagttgaacccacagctttcagacttctgtgtaaag
ttaacaggaatcacacagaaaatggttgacgaagcagactcgttcccagaggtccttcag
cgagtcgtcgattggcttcaggagagagagctcggaacgaaatacaaatatgccatcctg
actgatggggcctgggatatgagcaagttcctcaacatccagtgtcgtatcagccgcatc
agatatcctcagtttgcaaagaagtggataaacataaggaagtcatatggaaacttctac
aaggtgccccgcacgcagacgaagctgagcaccatgctgcagaagctgggtctgaagtac
gaaggtcgccctcactccgggctggacgactcgcgcaacatcgccaggatagctctccgc
atgctgcaggacgggtgccagctgcgcgtcaacgagcgcatgcacgccggccagctgctc
tcggttcccagctcggctcccgtggaaggagccccgccgccacacggcccccgaaagcag
agagtagagccagacactgaggcctgttgtgactcgttacccctcccatga
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