Lates calcarifer (barramundi perch): 108897617
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Entry
108897617 CDS
T04895
Name
(RefSeq) dnaJ homolog subfamily C member 10
KO
K09530
DnaJ homolog subfamily C member 10 [EC:1.8.4.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108897617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108897617
04131 Membrane trafficking [BR:
lcf04131
]
108897617
Chaperones and folding catalysts [BR:
lcf03110
]
Heat shock proteins
HSP40 / DNAJ
108897617
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
PDI family proteins
108897617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thioredoxin
DnaJ
Thioredoxin_2
OST3_OST6
Thioredoxin_8
Thioredoxin_6
Redoxin
Calsequestrin
Thioredoxin_3
TraF
Motif
Other DBs
NCBI-GeneID:
108897617
NCBI-ProteinID:
XP_050931232
UniProt:
A0AAJ8BDW5
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Position
LG1:complement(2563536..2575928)
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AA seq
794 aa
AA seq
DB search
MAYRVVLRAQQKHPVRFILPLLLLVTLLVAVWAESRDYYNLLGVSREATTREIRQAFKKL
ALTMHPDKNPGDHTAHEKFLQVNRAYEVLKDEDLRKKYDKYGEKGLDEQQGGRYESWSFY
RYDFGIYDDDLEIITLDSGDFEAAVNSGEIWFINFYFPRCSHCHQLAPTWREFAKEMDGV
IRIGAVNCGDNNHLCRRKGINSYPSLYIYRAGQKPEKFNGERSKDNLVRFSMQFITTTVM
QLWQGNVFSEIENAFMSGLGWLITFCSDTGDCLEPRTRQKLAGMLDGLVKVGWMDCTTQE
QLCASFQVTSGATALFPPGSSLDQQGSVLWLNTLDSKEIYSQVINHLPDLELLTSDSFQR
KLAHHRWLVSFTFGDRGTASNEYKKLQAFLRNDHIQVGRVDCIADSELCQSLYIHKPCVA
VFKGLGIHDFEIHHGKDVLYNIVGFARDSVRAHVTTLRPDNFPSDRKEPWLVDFFAPWCP
PCRALLPELRKASIQLAGQMKFGTLDCTIHHNLCSMYNIQAYPTTVIFNGSSVHEYEGQH
SADGILEFIQDLVNPSVVVLDPSSFAERVKGRAEGQIWAVDFYAPWCGPCQALMPEWRRM
ARMLSGQILVGSVDCQRFQTFCQSQGVRAYPEVRLYPSNARQPDRFMSYNGWHRDAHSLR
TWALSSLPRASVDLTPESFRSLVLSGQDHWVVDFYAPWCGPCQHFAPEFEVLARIVKGEI
RAGKVDCQAHYQTCQSAGITAYPTVRFYPYLGRRRYEHSGEPINSRDANVIADTIRQRLQ
LLLPQLHSKPKDEL
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagggttgtcctcagggctcagcagaaacatcccgtccggtttattctgcct
ctgctgctcctcgtcaccctgctggtggcggtttgggcagagagtcgagactactacaat
ctgctgggagtcagcagggaggccaccaccagagagatacgacaggctttcaagaagctg
gcgctcaccatgcaccctgacaaaaacccgggtgaccacacagcccatgagaagttcctg
caggtgaatcgagcctacgaggttctgaaggatgaagacctcaggaagaaatatgataag
tatggagaaaagggattggatgagcagcagggagggcgctatgagagctggagcttctac
cgttatgactttggtatctatgatgatgatttggagatcatcacgttggacagcggagat
tttgaggcggcagtgaactctggagaaatatggttcatcaacttctatttcccacgatgc
tcacactgtcaccagctggctccaacgtggagggagtttgccaaggagatggatggagtg
atcaggattggagcagtgaactgtggagacaacaaccatctctgcaggaggaaaggcatc
aacagctaccccagtctgtatatatacagagcaggacagaaaccagagaagtttaatggg
gagcgttcgaaagacaacctggtccgcttctccatgcagtttatcactacaactgtcatg
cagctgtggcaaggtaatgtgttcagcgagatagagaatgcgttcatgtcagggctcggc
tggctgatcaccttctgctctgacactggagattgcctggagccaagaacaagacagaaa
ctggcaggaatgttggatggcctggttaaagtgggatggatggactgcaccacacaggaa
cagctctgtgccagtttccaggtgaccagtggagcgactgctttgttcccacctggaagt
tctctggatcaacaaggcagtgtactgtggctgaatactctggacagtaaagagatttac
agtcaggtcatcaaccatctgcctgacctggaactgctgaccagtgacagcttccagagg
aagctggcccatcatcgctggttggtcagttttacgtttggagacagaggcaccgcctcc
aacgagtacaagaagctacaagctttcctcagaaatgaccacatacaggttggcagagta
gactgtatagcagactcagagttgtgtcagtctctctacatccacaaaccctgtgtggct
gttttcaaaggactgggaatccatgactttgagatccaccacggtaaagatgtgttgtac
aacattgtggggtttgcgagggacagtgttcgcgctcatgtgacgactctgaggcccgac
aacttcccctcagacagaaaggagccctggctggtcgacttctttgctccgtggtgtcct
ccatgccgagctttactgcctgagctgagaaaagcttccatccagttggctggacagatg
aagtttggcactctggactgtaccatccaccacaacctctgctctatgtataatattcag
gcgtaccccaccacagtgatctttaacggttcctctgtgcatgaatatgaaggacagcat
tcagcggacggcatcctggagttcatacaggatctagtcaatccatctgtggtggtcctg
gatccttccagcttcgctgagagagttaaaggtcgagctgaagggcagatctgggcagtg
gatttctacgctccctggtgtggtccctgtcaggctctgatgccagagtggagacgtatg
gccaggatgctgtcgggtcagatcctggtcggttcagttgactgtcagcggtttcagacg
ttctgtcagagtcagggtgtgagggcgtaccctgaagtccgactgtaccccagcaacgcg
cggcagccagatcgcttcatgagttataacggttggcacagagatgctcattcactgaga
acatgggctctgagttctttacccagagcgtcggtggatctgactccagagtccttccgg
tctctggttctgtcgggccaggatcactgggttgtggatttttacgccccctggtgtgga
ccctgtcaacactttgccccagagtttgaggtccttgctcggattgttaaaggggagatt
cgggcaggaaaggtggactgtcaggctcattatcagacctgtcaatcagctggaatcacc
gcctacccaactgtcagattttacccgtacctgggaagaaggaggtatgaacacagcggg
gaacccatcaacagccgggatgctaacgtgattgctgacaccatcagacagcgactacag
ctactgttgccacagttacacagcaaaccaaaggacgagctctga
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