Lates calcarifer (barramundi perch): 108897682
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Entry
108897682 CDS
T04895
Symbol
zfyve16
Name
(RefSeq) zinc finger FYVE domain-containing protein 16 isoform X1
KO
K04679
MAD, mothers against decapentaplegic interacting protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108897682 (zfyve16)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108897682 (zfyve16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108897682 (zfyve16)
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108897682 (zfyve16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SARA_C
SARA
FYVE
Motif
Other DBs
NCBI-GeneID:
108897682
NCBI-ProteinID:
XP_018552936
LinkDB
All DBs
Position
LG9:complement(1207244..1233232)
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AA seq
1439 aa
AA seq
DB search
MDSFFKAAVCDLDKLLDDFELNTEELDCKSVFLKPPAYPFSSLGSQCLSSEASTVPPSLP
DLNSLHYGSATSSSGHHNRSTDDREVKGQPLTGVDLLSSVDRRPAKSSAPPCPDRALKPV
CDLVNDTSSAILVRANSHDAFSELDAVEKQMEEEEEEEALLVDFDSPVVTEEQNAGSRDA
KEEQASAGKDELLSLDSHEQSGGYSASLSLLDVILPAAVERGCESADDSPSQRTAESADR
EERDCEEVACTNQVVDNSLDHCEPEGSLPAESIKDTTTTTSVHKEDESEEASDKGEAESP
AGLTSGATDSEPVGLSCLPIAVSMCGALVKPKTTEGESGQAAEQCEEADVSESTEADSLS
ALEAKEDQSCLKEPVSSSVSVSEQIAEGRQSPEGQQVSAEPAAAAPSVDHTSSDHPEPSP
VDPPEFGFEYLPESDQAELLVTDEELDAFLQAHTEAEQGRNASYCSTSRDSTQPESLSQP
NGDLEDRLVEEELRSCGRARREELEGLASPESDRTMCVSVEGSFNPGAPSQSQDSCRPCQ
EEPELSSSGASHSLTSNTFQPQHSGSPDQQPSYGGARPKQLHCQTARSPPAGEDEEEGEQ
PQTLSGFSKGPNAAEDEESSPISPSLTEEHSNIRDSSPIYATQEHQDYSVGYDELSEPPP
YPGEPPTDGARSVNWKREGVEELGSRQPAWVPDSEAPNCMNCYQRFTFTKRRHHCRACGK
VYCAVCCNRKCKLKYLEKEARVCVVCFDSIHRAQALERMMSPTGPSPNPNVPSEYCSTIP
PLQQARAAGTLNSPPPTVMVPVSVLKHPNNDSCPREQKRVWFADGILPNGEVADTTKLSV
TSRRSSQEFSGVSPDQTTPGPAAPEVGVGGPSTPEASGAVEVVRPPVSGPWDYALLSGIS
SSVKRVPSLLPDNEDELPPLLITTGEDDGGDVLVEESPAPCQILHLLEEGGPRPLTFVLN
ANLLINVKLVTYSARQCWCFGSNGLQALGQRELVFLLECLPEEKTLPKDLFTLYLTIYQD
ALKGKFLEELDNVTFTSSFLGSKDHAGMLFFSPTCQPLDGLTLPPQPFLFGLLIQKLEVP
WAKVFPLRLLLRLGAEYSVYPTTLTSVRFRDSVYRETGHTIMNLLADLRNYQYSLSVVEG
LRIHMEMGHSYIDIPKSSFNEMQKVVNSSNEHVISIGASFSSEADSHLVCLQNEEGNYQT
QANSMPGKTRTVTGASFVVFNGALKASSGFIAKSSIVEDGLMIQIPPETMESLRSALREQ
TDFHIPCGRNDGAELRENVTVRWVDWSSPVNAGRTSGVDGRPLDGVRSVRMQQDAEFESD
GRAIRCTEVFYQLKSPDCSLASVLSSCSVFQKEMALAACSALTPHLAVLTSSGINSISLR
ISTQADMVEYQAGSGGRLLPQRYMNELDSALIPVIHGGSASVPQTAMDVEFTFYVTHTI
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcttcaaggcagctgtatgtgatctagataaactgcttgatgactttgag
ctcaacactgaggagcttgattgcaaatctgttttcctgaagcctcctgcgtaccccttc
tcctcgctgggctctcagtgtttatcctcagaggcgtccactgtcccgccgagcctcccc
gaccttaattctcttcattatggttctgccaccagctccagcggtcaccacaaccgcagc
acggatgacagagaggtcaaaggtcagcctctcaccggggtggaccttctctcctctgtg
gatcgtcggccggctaagagctctgcccctccctgccccgatcgggctctgaagccggtg
tgcgacctcgtgaacgacaccagctcggccatcctggtcagggccaacagccacgatgcg
ttcagcgagctggacgcggtggaaaagcagatggaggaggaggaggaggaggaggctctg
cttgtggactttgacagccctgtggtcacggaggagcaaaacgctggctctagagacgcc
aaggaggagcaagcctccgcagggaaagacgaactgctcagtcttgactcccatgagcag
agtggtggatactctgcctcactcagtctgctggacgtcattcttcctgcagcagtggag
agaggctgtgagtctgcagatgattcaccgtcacagaggacggctgagtcagctgacaga
gaggagagggactgtgaggaggtggcttgtacaaaccaagtggtggataactctttagac
cactgtgaaccagagggctccctgcctgctgagagcattaaagacacaacaacaaccacc
tcagtgcataaagaggacgagtcagaagaagcctcagataaaggtgaggcagagtctcct
gcaggtctgacatctggggctacagacagtgaaccggtgggtttgtcctgcctgcccata
gctgtgtccatgtgtggagctctggtgaaaccaaagaccacagagggtgagtcaggacaa
gctgcagagcaatgtgaggaggcagatgtgtctgagagcacagaggccgactccctgtca
gcgctggaggccaaggaggatcagtcctgtttgaaggaacctgtttcctcgtcagtgtcg
gtgtccgagcagatcgcagagggcaggcagtcgccagaggggcagcaggtctctgctgaa
cctgctgctgctgccccctctgtggaccacacctcctctgatcacccagaacccagtccg
gttgatcctcctgagtttggctttgagtatctgccggagagcgaccaggccgagctgctg
gtcactgacgaggagttagatgcgttcctgcaggcgcacactgaagcagagcagggcaga
aacgcctcttactgcagcacctccagagactcgacacaacctgagagtctctcacaacca
aacggggatctagaggacaggctcgtagaagaggaactgagaagctgcggtcgagccaga
cgggaggagctagagggtctggcttctccagagagtgacagaacaatgtgtgtgtctgtg
gagggaagttttaaccccggtgctccgtcacagtcacaggactcttgcagaccttgccaa
gaagagccagaactctcctcctccggtgcgagccattctttgaccagcaacactttccag
ccccagcacagcggtagcccagatcagcagccctcctatggaggagcgagacctaaacag
cttcactgccaaactgcaagatctccaccagcaggggaagacgaagaagaaggggagcag
cctcagacactcagcgggttttcaaaagggcccaatgcagcagaggatgaagagagttca
cccataagcccgagtcttacagaggagcattccaacattagggattcaagccctatatac
gccactcaggagcatcaggattacagtgtggggtatgatgaactctcagagcccccacct
taccccggggagccacccacagatggtgccaggtcagtgaactggaagagagagggagtg
gaggagctggggagcaggcagcccgcctgggtgccagactctgaagcccccaactgtatg
aactgttaccagaggttcacctttaccaagaggaggcatcactgtcgtgcatgtgggaag
gtttactgcgctgtgtgctgcaacaggaagtgtaagctcaagtacctggagaaggaggct
cgtgtgtgtgtcgtctgcttcgacagcatacaccgagcccaggccctggagcggatgatg
agtcctacgggtcccagtccaaaccccaacgtcccatctgagtactgcagcaccatcccc
cctttgcagcaggctcgtgccgccggcactctaaactcacctccacccaccgtcatggtg
cctgtgtccgttctcaaacacccaaacaacgacagttgtcctcgtgaacagaagcgcgtg
tggtttgctgatggcatcttgcccaacggagaggtggcagacacgaccaagctgtcggtg
acgagccgcaggagctcccaggagttcagcggcgtcagcccggaccaaacaacacccggc
cctgcggcgccagaggttggagtcggtggcccctccacccccgaagcctccggagctgta
gaggtggtccgacctccggtttctggaccctgggattacgccctgctctctgggatcagt
tcctcagttaagagggttcccagtctgctgccagacaacgaggacgagctccctcctctg
ctcatcaccactggtgaggacgacggaggagacgtattagttgaggaaagtcccgccccg
tgtcagatccttcacttgttggaggaaggaggacctcgacctctgacatttgtcctgaac
gccaacctgctcatcaacgtcaaactggtcacatactccgctcggcagtgctggtgtttt
ggttcgaatggtcttcaggcgctggggcagagagagctggtgtttttgttggagtgtttg
ccagaggaaaaaactctccccaaagacctcttcacgctctatctcaccatttatcaagat
gccctgaaagggaagtttttggaggagctggataacgtgacgttcacgagcagtttcctg
ggcagtaaggatcacgctgggatgctcttcttctctcccacctgtcagcctctagatggc
ctcactctccccccgcagcctttcctgtttggcctgctcatccagaagctggaggtgccc
tgggccaaagtctttccactcaggctgcttctgcggcttggagctgaatacagcgtgtat
cccactacactgaccagtgtccgttttcgggactccgtgtatcgagagacaggacacacc
attatgaatttactggctgatctgaggaactaccagtacagtctgtcagttgtggagggc
ctgaggatccacatggagatgggccacagttacatcgacattcccaaaagtagcttcaat
gagatgcagaaggtggtgaattcgtccaacgagcacgtcatcagtatcggagcgagcttc
agctcggaggccgactctcacctggtgtgtctgcagaacgaggagggaaactatcagacc
caggctaacagcatgcctgggaagacccgcacagtgactggagccagttttgtcgtgttc
aacggggccctgaaagcctcctcaggcttcattgcaaagtccagcattgttgaagatggg
ttgatgattcaaatccccccggagaccatggagtctctgcgctctgccctgagggagcag
acagacttccacataccctgcggcaggaacgacggagcggagctccgagaaaacgtcact
gtccgctgggttgactggagttcacctgtcaacgcaggtagaaccagcggggttgatggg
aggcctctggatggagtgcgcagtgtgaggatgcagcaggacgcagagttcgagtcagat
ggccgcgccatcaggtgcacggaggtgttctaccagctgaagagtcctgactgcagcctc
gcgtcagtgctgtcgtcctgcagcgtgtttcagaaggagatggctttggccgcctgcagc
gctctgactcctcacctggccgttctcacctccagcggcatcaactccatctctctccgc
atctccacacaggctgacatggtggagtaccaggctggctctggaggcaggctcctccct
cagcgctacatgaacgagctggacagcgccctgatccccgtcatccacggaggtagcgcc
agcgtaccacagactgccatggacgtggagttcaccttctacgtcacacacactatctaa
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