Lates calcarifer (barramundi perch): 108897738
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Entry
108897738 CDS
T04895
Symbol
tars3
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108897738 (tars3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108897738 (tars3)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108897738 (tars3)
Enzymes [BR:
lcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
108897738 (tars3)
Amino acid related enzymes [BR:
lcf01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
108897738 (tars3)
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108897738 (tars3)
Prokaryotic type
108897738 (tars3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Nup54
Motif
Other DBs
NCBI-GeneID:
108897738
NCBI-ProteinID:
XP_018553011
UniProt:
A0A4W6G627
LinkDB
All DBs
Position
LG2:20285180..20297006
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AA seq
813 aa
AA seq
DB search
MAECLAARLAAQEEQIRVLTREISTLRDGLSRGLDATGVAVITPELENLRTENEKLRYRL
LHLRRGLQAELELEETQGKRQQGAKCGKAPEKNTSKEQQINNRADNKVATPDTKPGDRNK
KEKKQDKGQGDGGVKEQKPWPGYIAERLSLYEELKRESDALLAKKAADSKPITVELPDGQ
KVAGKAWVTTPYQLACGISQGLADNAVISRVNGELWDLDRPLERDCSLEILRFDNEDAQA
VYWHSSAHILGEAMERFYGGCLCYGPPIENGFYYDMFLDGQKGVSSTEFGDLETLCKAVV
KEKQPFERLEISKETLLKMFKYNKFKCRILNEKVTTPTTTVYRCGPLIDLCRGPHVRHTG
KIKAMKIYKNSSTYWEGRSDMETLQRIYGISFPDSKMLKEWERFQEEAKNRDHRKIGKDQ
ELFFFHDLSPGSCFFMPRGAHIYNTLTEFIRDEYWRRGFQEVASPNIYNSKLWETSGHWQ
HYSENMFSFPVEDDIFALKPMNCPGHCLMYSHRPRSWRELPLRLADFGVLHRNELSGTLT
GLTRVRRFQQDDAHIFCTMDQIETEMKGCLDFLRCVYDVFGFSFQLHLSTRPEKYLGDIA
VWNQAEKQLENSLNEFGEPWKLNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIR
FNLTFVGKDGDDRGRPVIIHRAILGSVERMIAILTENYAGKWPLWVSPRQVMLVPVNPSC
EDYAKKVCKQFTEAGFMADADLDSGCLLNKKIRNAQLAQYNFILVVGEKEKMTNSVNVRT
RDNKVHGELSVAEVLARLTLLKQSRCRNAEEEF
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtgcttggctgcacgtttggccgcccaggaggagcaaattcgagttctcacc
agggaaatctcaactcttcgggatggactaagccggggtctggacgccaccggtgttgcg
gttatcaccccggagttagagaacctgcggaccgagaatgagaagctcaggtaccggctg
ctgcacctccggcggggtctgcaggcggagctggagctggaggagacgcaggggaagaga
cagcaaggagcgaagtgtggcaaagctccggagaaaaacaccagcaaagagcagcagata
aacaaccgagccgataataaggttgcaaccccggataccaaaccaggtgacaggaacaag
aaggagaaaaagcaggataagggacagggagatggaggcgtgaaagagcagaagccctgg
cctggatacattgcagagcgcctcagcctctatgaggagctgaagagggagagtgatgcc
ctgcttgcaaagaaagctgcggacagcaagcccattactgtggagctgccagatgggcaa
aaggtggcgggcaaggcttgggtcacaacaccgtaccagcttgcttgtggtatcagccaa
ggcctggctgacaatgctgtgatttctcgggtgaatggggagctctgggacctggacaga
cctctcgagcgggactgctctcttgaaatcttgcgctttgacaatgaggatgctcaggct
gtttactggcactccagtgctcacatcctgggggaggcaatggagcgtttctatggaggt
tgcttatgttatggtcccccaatagagaacggcttctactatgacatgttcttggatgga
cagaagggtgtgtctagtactgagtttggggacttggagactttgtgtaaggctgtggtg
aaggaaaaacagccctttgagaggcttgagatcagcaaggagacactgctgaagatgttt
aagtacaacaaattcaagtgccgcattctgaatgagaaagtcaccacccccactacgaca
gtctacagatgtggacccttgattgacctgtgcagaggtccccatgtcagacataccggc
aagatcaaggccatgaagatctacaagaactcttccacctactgggagggtcgctccgac
atggaaacactacagaggatctatgggatttccttcccagactcaaagatgctgaaggaa
tgggaacgttttcaggaggaggccaagaatagagaccatcgcaagattggcaaagatcaa
gagttgttcttcttccatgatctcagccctggcagttgtttcttcatgccccgtggagcc
cacatctacaacacgctcactgagttcataagggatgagtactggagaagaggctttcag
gaagtagcctcccccaacatctataacagcaaactgtgggagacatctggccactggcaa
cactacagtgaaaacatgttctccttccccgtggaagatgacatctttgctctcaagcca
atgaactgccccgggcactgtctgatgtacagtcacaggcctcgctcgtggagggagctc
cctctgaggttggcagatttcggggtcctccacaggaacgagctgtcgggaacactaact
gggctgaccagagtgcggcgcttccagcaggatgacgctcacattttctgcactatggac
cagattgagacagagatgaagggctgtctggacttcctccgctgtgtttacgatgtgttt
ggcttctccttccagcttcacctctccacccgtccagaaaagtatctgggtgatattgct
gtgtggaaccaagctgagaagcaactggagaacagcctgaatgagtttggggagccatgg
aaactcaaccctggagacggagctttttatggacccaagattgacattaagatcaaagat
gcaattggacgttaccaccagtgtgcaaccattcagctggacttccagctgcctatccgc
ttcaacctgacctttgtggggaaggatggggatgacagaggccgaccagtcatcatccat
cgtgccatcctgggctcagtggagaggatgattgccattctcacagagaactatgcaggg
aaatggcctctgtgggtttctccacgtcaggtgatgttagtgcctgtcaacccttcctgc
gaggattacgccaagaaggtgtgtaagcagtttacagaagctggtttcatggcggatgct
gacctggactctggctgtcttctaaacaagaaaatccgaaacgcgcagttggcccagtat
aacttcattctcgtggtcggagagaaggagaagatgactaacagcgtcaatgtgcgcacg
agggacaacaaagtccacggagagctgtcggtggccgaggtgctggctcgcttgaccctg
ctcaaacaatcccgctgtcgaaacgcagaggaggagttctga
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