Lates calcarifer (barramundi perch): 108897743
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Entry
108897743 CDS
T04895
Symbol
zgc:165481
Name
(RefSeq) E3 ubiquitin-protein ligase RNF182
KO
K11983
E3 ubiquitin-protein ligase RNF182 [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108897743 (zgc:165481)
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108897743 (zgc:165481)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108897743 (zgc:165481)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
108897743
NCBI-ProteinID:
XP_018553021
UniProt:
A0A4W6G1G5
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All DBs
Position
LG2:complement(18880978..18898324)
Genome browser
AA seq
269 aa
AA seq
DB search
MKDSTAETTGVEEGESNTLGQEHDLKMSCPQPESEEKDCPPPEELECKICYQRFNAHNRK
PKILDCLHRVCARCLIKILDLADGAGCISCPFCRHQTEITEFEVSALPDDANIMSHLAMR
DKSWSSDHNREVVLTPKSFSSSSPSHDSSNCLVITIMEVQRDSQHSPSRNGSSDIYAEQS
LDSVSMGSNGPADQDALSKFCNHVPRILVWLLGFLYFGSLPLGIYLLVIQKVTLGIVCVS
LVPSSLTVCLVYGFCQCLCQGVCDCSPRG
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacagcacagcagagacaactggagtggaggagggggagtcaaacacattggga
caagaacatgacttgaagatgagctgcccccagcctgagtcggaggagaaggactgtcct
ccaccagaggaattagagtgtaaaatctgttaccagcgcttcaatgcccacaaccgtaaa
cctaagatcctggactgtctacaccgggtctgtgcccgctgcctcattaagatcctggac
cttgctgatggcgcaggctgcatctcttgccccttttgccgacaccaaactgagatcaca
gagttcgaggtgtcagcccttcctgacgatgctaacatcatgtcccacttggcaatgcgg
gacaaatcctggagctctgaccacaacagggaggtggtcctgactccaaagagtttctcc
tcctctagcccgtctcatgactcctccaactgcctggtcatcactattatggaagtgcag
agggactcacagcactccccaagccgcaatggcagctctgacatttacgctgagcaaagc
ctggactctgtatcgatgggctccaacgggccagctgatcaggacgccttgtccaagttc
tgtaatcatgtcccacgcattctggtctggttgctgggtttcttatactttggctcactg
cctctaggaatctacttgttagtgatccagaaagtgactctgggtattgtgtgcgttagc
ttggtgccatcaagcttgacagtttgcctggtctatggattttgtcagtgtctgtgtcag
ggtgtgtgtgactgctcccccaggggctga
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integrated database retrieval system
