Lates calcarifer (barramundi perch): 108897780
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Entry
108897780 CDS
T04895
Name
(RefSeq) synaptotagmin-like protein 1 isoform X1
KO
K17598
synaptotagmin-like protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108897780
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108897780
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108897780
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
108897780
Small GTPases and associated proteins
Rab associated proteins
108897780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
Motif
Other DBs
NCBI-GeneID:
108897780
NCBI-ProteinID:
XP_018553071
UniProt:
A0AAJ7QDI5
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All DBs
Position
LG3:complement(10359932..10369280)
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AA seq
541 aa
AA seq
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MFIHASVSGMEGERVDSVPDLSHLTEQEQSTILQVLQRDLELRRRDEGRVRILQQTGTDP
ARLRLLSGSWFSEECSKRHRNRVSGCELVHATIRCRRVKSRDVPLTELFNGETEEPTNNN
NTSPEAERRLKDSKYEENDGSSGSLTPTPTPRTKSPVAQGLQHTSSSSSSKDCERRSNGH
SEEPEDDFDGHNGDTDSLSSSLTEPVSLKTSSSTSSLHSGYTLSGSMMSLFSSGDFGLVE
VRGRIQFSLVYETQKEELLVKVYRCEDIASARKNRSDPYVKTYLLPDKSSHSKKKTSVKK
KTLNPIYDQTLRYKVRIGELRSRTLNLSVWHAEPLARNVFLGEVEVALAQWDWTCNQPLW
QDLQPRVHLNPDSISSRGTIMLSIKFIPDGFEGGGLPLTGEVHIWLREAQGLLSNKGGAI
DSFVRSYILPDASRQSGQKTRVVKRSISPTYNHTMVYDGFHTSDLREACAELTVWQREGL
KTHTLGGIRLSCGTGQSYGEAVSWMDSTEEEIAVWTSMIENPNHWIDTSLPIRTNLAHRS
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgttcatacacgcttctgtctcagggatggaaggggagcgggttgactctgttcctgat
ctgagccacctgacagagcaggagcagtccaccatcctccaggtcttacaacgtgacttg
gagttgcgacgtcgtgatgaaggacgtgtaaggatcctccagcagacagggacagacccg
gcacgtctgcgcctcctgtcggggtcatggtttagtgaggagtgcagcaaacgccatcgt
aaccgggtgtcgggctgcgagctcgtccacgccaccatacgctgcaggagggtgaagagc
agagatgtgcctctgactgaactgtttaatggagagacagaggaacccaccaacaacaac
aacacttctcctgaggcagagagaagactgaaggacagcaaatatgaggagaatgatggg
agttcaggaagtttgacacctacacccacacccagaacaaaaagtcctgtagcacagggt
ctccaacatacaagtagttcctcgtcatccaaagactgcgaaaggagaagtaatggccat
tcagaggaacctgaggatgactttgacggtcacaacggagacactgactcactgagcagc
agcctgacagagccagtttctctgaaaaccagcagctccaccagcagccttcattcaggc
tacacgctcagtggaagcatgatgagtctgttcagctcgggagattttggactggtggag
gtgaggggccgtatccagttctcattggtttacgagacccagaaggaggagctgctagtt
aaagtgtatcgctgtgaggacatcgcctcagcacgaaagaaccgctccgacccatatgtt
aaaacctatctcttaccggacaagtcgagtcacagtaagaagaaaacttcagtgaagaag
aagacactcaacccgatctatgatcagacactcagatataaagtgaggattggggagctg
cggagtcggaccttgaacctgtcggtgtggcacgccgagcccctcgcgaggaacgtgttc
ctgggtgaggtggaggtggctttggcccagtgggactggacgtgcaatcagccgctgtgg
caggacctgcagccacgggttcatttgaatcctgactccattagcagtcgtgggaccatt
atgctctctattaagttcatcccagacggattcgagggtggtggtctgccactgacagga
gaggttcacatctggcttcgggaggctcagggtctcctgtccaacaaaggaggtgcaata
gactcattcgtcagaagctacatactcccggatgctagtagacagagtggtcagaagaca
cgtgtggtgaagcgctctatcagccctacctacaatcacaccatggtgtatgatggcttc
cacaccagcgacctgagagaggcctgcgctgagctgactgtctggcaacgcgaagggtta
aagactcacaccttgggtgggattcgtctgagctgtggaactggtcagagttatggtgag
gctgtcagctggatggactccacagaggaggagatcgccgtgtggacctccatgattgaa
aacccaaaccactggattgacacgtcactaccgatcagaactaacctcgcccaccggtct
gagtga
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