Lates calcarifer (barramundi perch): 108897797
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Entry
108897797 CDS
T04895
Name
(RefSeq) uncharacterized protein LOC108897797 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcf00535
]
108897797
Proteoglycans [BR:
lcf00535
]
Cell surface proteoglycans
Others
108897797
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neural_ProG_Cyt
MRAP
PIRT
DUF6377
Motif
Other DBs
NCBI-GeneID:
108897797
NCBI-ProteinID:
XP_018553101
UniProt:
A0AAJ7QDA7
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Position
LG3:9732470..9747204
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AA seq
674 aa
AA seq
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MARGDSRLGTWQVLLTISLVIIPLSAHGRHSLARRHHHHNQSSVNKEALNTRMVLSDDSA
ERDHLIGAGLGAKLPLSSTKRHHSHKHAHLDFVEEDPPAVEELTAGGAGPDQPGNPLSDD
VITVEFHSPAPDVVPSDSALDWAKAPKPQKQKGGDPTAWTLSDFYDYLSPDDDLSALDTT
PEPEPTPSPPADMEDENPLLAGAPVVPENVKPNKDSGPSLPAPPMPGPDKGDGLGLGGAM
GADGCRLGFVRSGPGVCVSQCDIEPNFCFNRGVCTVVAGMGAFCRCNVQDYIWNKGTRCD
WAVTEFQVICVVVGVASFVLLLLFMIIVFFAKRLHRLKNENKRLRKRSKYRPQSSEPQTD
GLSVSTTADGSQPNVRKLCDTPPPAPQAHTQNLAYYDNIICQDEPQKQEDPAKSPQPKEE
GSMNILNSHSPKHENNRPMSVVHDHGHTPNNTEENAEDGVTIGLEVLLPKEAKLHSDTNS
PLQYDVFLYKVANNGESTSPSKAPPTHSANSYSSSHPVPKSPKSPRTPNMQKSPKVPKSP
RSPRHSKEHPCVNREPLSGRHSSPGRYPSPGRHPSPVRHSAPGCYSSPTCHLPSHHSPAQ
YKCMPTSASTPPQLRRPRGRSQAPGSECSRTRREYQSGYIHPSPSSPHLTQPPPSPSSRV
KYSPVSTRSLPPLS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcggtgacagtcgtttagggacctggcaggtgctactgaccatctcactggtc
atcatccccctgtctgctcacgggaggcattcactggccaggcgccatcatcaccacaac
cagtcatctgtcaacaaggaggccttgaacaccaggatggtcctaagtgacgactcggca
gagagagaccacctgattggagcaggtctcggggccaaactccctctcagctccaccaaa
cgtcaccattctcataaacacgcccacctggacttcgtagaggaggacccacctgcggtg
gaggagctcaccgccggtggggcgggtccggaccagccaggaaaccccttgtctgatgac
gtcatcaccgtggagttccacagcccggcgccagatgtcgtcccctccgactctgctctg
gattgggcgaaagcccccaaaccccagaagcagaaaggtggagaccccaccgcatggacg
ctttctgacttttacgactacctgtcgcctgatgacgacctctctgcgttagatacgacc
ccggagcccgagcccacaccttcgcccccggccgacatggaggatgagaatccgctcctt
gccggtgctcctgttgttcctgagaacgtgaagcctaacaaggacagcgggccctcctta
cccgctcctcccatgcctgggccagataagggcgatgggttaggcttaggtggcgccatg
ggggccgacggctgcaggctgggctttgtacgctctggtcccggggtgtgtgtgtctcag
tgtgacattgaacccaatttctgcttcaatagaggagtgtgcaccgtggtggcaggaatg
ggcgccttctgcaggtgcaacgtgcaggactacatctggaacaaaggcacgcgctgcgat
tgggcggtcacagagttccaggtgatatgcgtggtggtgggcgtggcctcctttgtgctc
ctcctactcttcatgatcatcgtattctttgccaagaggctgcaccgcctcaagaacgag
aacaagcgccttcgcaaacgcagtaagtaccgcccacagagcagtgagccgcagacggat
ggcctctccgtttccacaacagccgacggctcgcagccaaacgtaaggaaactgtgcgac
acccctccgcccgccccccaagctcacactcaaaacctggcgtactatgacaacattatc
tgtcaggatgagcctcagaagcaggaggacccagcaaagtcaccgcaacccaaagaggag
gggtctatgaacatcctcaactctcattcccccaagcacgagaacaatcgccctatgtct
gtcgtccacgaccacggccacacccccaacaacacagaggaaaatgcagaggatggagtc
actattggcctggaagtgctcctgcccaaagaggccaagctccactcagacaccaactca
ccccttcagtatgacgtcttcctctacaaggttgccaacaatggagaatccacatctccc
agcaaagcccctcccactcacagtgctaactcatactccagctctcacccagttcccaag
tcacccaaatcgcccagaacacctaacatgcaaaagtcgcccaaggtgcctaagtcaccc
agatcaccaagacactccaaggagcacccatgcgttaaccgtgaacccttgtctggaagg
cactcctcacctggccgttacccctcacccggtcgccacccgtcaccggttcgtcattcc
gcacctgggtgctattcctcccccacctgccatctgccctcccaccactctcccgcccag
tacaaatgcatgcccacctccgcttccaccccgccccagctacgcaggcccagaggtcga
tctcaagctcccggctcagaatgctcaaggaccaggagagagtaccagagtggatacatt
catccatccccctcctcacctcatcttacccagccgcctccatcaccatcatccagggtg
aagtacagcccagtcagcacccgatctctgccaccgctctcctga
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