Lates calcarifer (barramundi perch): 108897857
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Entry
108897857 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: protein LRATD2a
KO
K22810
protein FAM84B
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108897857
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108897857
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRAT
SH3_CYT4
NLPC_P60
Motif
Other DBs
NCBI-GeneID:
108897857
NCBI-ProteinID:
XP_018553171
UniProt:
A0AAJ7QDC9
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Position
LG3:complement(11306994..11310078)
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AA seq
272 aa
AA seq
DB search
MGNQMDKLSHLSYAEVPTVDPNGVDTEDGPRIGVSYIFSNDDDELEDGCAVDGTERDPNQ
EEKQYDQRDEVECAVYNRDECIYEKXAKSASLEVYSPENLLNKCKQGDLVEFVATGQYPH
WAVYVGDFQVVHLHRAEVKNSFLTDASQGRRCRIVNDLYKFKALGPDMVVQNAMEQVGLK
DRELSWRNSECFAAWCRFGKREFKMGGEIRIGKQPYRLKIFMSDKHSHVLEFQSLEDMVM
EKRRNDHLGRTAVLQELATHFNSVEEAKSSSK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccagatggacaaactgtcacatttaagttacgcagaagttcccacggtggac
ccgaacggcgtggatacggaggacggaccgcggatcggcgtctcgtacatattttccaac
gatgacgacgagctggaggacggctgcgctgtcgacggcacagagagggacccgaatcag
gaagagaaacagtacgaccagcgcgacgaggtggagtgcgccgtctacaacagggatgag
tgtatttacgagaagnncgccaagtctgccagtctggaggtttactccccggagaatctg
ctgaacaaatgcaagcagggcgacttggtggagttcgtggcgacgggacagtacccgcac
tgggccgtgtacgtaggggactttcaggtggtgcacctgcacagagccgaggtgaaaaac
agcttcctgacggacgccagccaggggaggaggtgccggatcgtcaacgacttgtacaaa
ttcaaagccctgggtccggacatggtggtgcagaacgcgatggagcaggtggggctgaag
gaccgagagctgagctggagaaactccgagtgcttcgcagcctggtgcaggttcggcaag
agggagttcaaaatgggcggggagatacggataggcaagcagccctacaggttgaaaata
ttcatgtcggacaaacactcgcacgtgctggagtttcagagtttggaggacatggtcatg
gagaagaggaggaacgatcacctgggcaggacagccgtgttgcaggagctggccactcac
ttcaacagcgtggaggaggcgaaaagttcttcaaaataa
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