KEGG   Lates calcarifer (barramundi perch): 108897937
Entry
108897937         CDS       T04895                                 
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
  KO
K23533  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108897937 (lingo2b)
Membrane trafficking [BR:lcf04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    108897937 (lingo2b)
SSDB
Motif
Pfam: LRR_8 LRR_4 I-set LRR_5 Ig_3 LRR_1 LRR_14 Ig_2 ig LRR_EndoS LRR_9 LRR_Zer-1 V-set LRRNT DHU1_N Sp38
Other DBs
NCBI-GeneID: 108897937
NCBI-ProteinID: XP_018553256
UniProt: A0A4W6F8B8
LinkDB
Position
LG19:6658791..6690331
AA seq 622 aa
MTEGNVGKRDMRHPAPHHCHLILGGALLLLLASSALSCPARCECSAQSKSVSCHRKRLPT
IPEGIPIETRVLDLSKNKLRLITPDNFSSFQQLEDLDLSDNLISVVEPNSFRSQLALRSL
NFRSNLLQLVPIGVLSGLTNLTRLDLSHNRLVVLLDHAFQDLRKLTSLEVGDNELVFISQ
RAFTGLFGLQSLTLERSNLTVVPTDALAHLHSLVELRMRYLSISFLKPYSFKRLSRLRRL
EIDYWPWLDTLPPHSLHGLNLTMLFITNTNLSAFPGAALRNLPYLTHLNLSYSRIQHIHQ
GELGQLPCLLELRLQGAQLVSIEPFAFAGLKSLQLLDVSQNRLDSLERGVFASPDSLQRL
CLGGNPLVCDCRLLWLLTSHKPPSLQILDVQPECSAPEHLLGKTLRDLKEPLVSRYMTCT
KPRIGPNTTQLLMADEGQPARLSCMAEGAPRPSVVWITPHRRYITAKSSGRVEVQPDGTL
EIKAAELHDSGVYLCIASNPAGNASLSASLAVKSLGIGDRSHYSNRSSNYLTDSNSTWGN
GTVLYNMTVPIDIKTIIISTAMGCLSFLGVVVFCFLLLFAWSRGKGRHKSNFDIEYVPRK
SNGAAAEVTETSGPRRVNMKMI
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgacagagggcaacgtgggtaaaagagacatgcgacacccagccccgcaccactgccac
ctcatcctgggcggggccttgctgcttctcctggccagctcagctctgagctgccccgcc
cgatgtgagtgctctgcccaaagtaaatcggtcagctgccaccgcaagcgcctgcccact
atccctgaaggcatccccattgagacacgcgtcctagacctcagcaagaacaaactacgc
ctcatcacgccggacaacttctcttcattccagcagctggaggacctggacctcagtgac
aacctcatcagcgtggttgagcccaactcgtttcgttctcagctcgccctccgctcgctc
aacttccgcagtaacttgcttcagctggttcccattggcgtcctgtcgggcctgaccaac
ctcacccgcctcgacctcagccacaaccgactggtggttctcctggatcatgccttccaa
gacctgcgcaagttgacgtctcttgaagtgggcgacaacgaacttgttttcatctctcaa
cgggcctttacaggattatttggactccaaagtctgaccctggaacgttccaatctgacc
gtggtccctactgatgctctggcacatctgcacagtctggtcgaactgcgcatgcgctac
ctgagcattagttttctaaagccttactcctttaagaggttatctcgcctgcgccgacta
gagattgattactggccctggttggacacactgcctccccactcactgcacggactcaac
ctcacaatgttgttcataaccaacactaacctatctgccttccccggcgcagcgctgcgc
aacctgccctacctcacacatctcaacttgtcctacagccgaatccagcatatccatcag
ggagagctgggccaactcccatgcctgctagaactccgcctccaaggggctcagctggtt
tctatcgagccctttgcttttgcgggcctcaaatctttgcaactgctggatgtgtcacag
aaccgcctggactctctggagaggggagtgtttgcctcaccagacagcctccagaggctt
tgtctgggagggaacccattagtgtgcgactgcagattgctttggctgctcactagccac
aagcccccctctctgcagattctggacgtccagcctgagtgcagcgctcccgagcacctc
ctggggaaaactctgcgtgacctcaaagaacctctggtgtccaggtacatgacctgcacc
aagccaagaattggacccaacacgacacagctgctgatggctgatgagggtcagccagcc
cgcctgagctgcatggcagagggagcacctcgaccctctgtggtctggattacacctcac
agacgctacatcacagccaagagcagtggtagggtggaagtccaaccagatggtaccctg
gagatcaaggcagcagagctgcatgacagcggggtgtacttgtgtattgccagtaaccct
gctggcaacgctagcctgtcagcctctttagctgtgaagagcctgggcatcggggacaga
tctcactatagcaacaggagctcaaactatctgacagactctaacagcacatgggggaat
gggactgtactgtacaacatgacagtccccatagacattaagactatcatcatatctaca
gccatgggctgcctgtccttcctaggtgtggtcgtattctgcttcctgcttctgttcgcc
tggagccgagggaaaggacgccataagagcaactttgatatcgaatatgtccctcgcaaa
tccaacggggcagccgctgaggtgacagaaacaagtggcccaagacgggtcaacatgaaa
atgatttga

DBGET integrated database retrieval system