Lates calcarifer (barramundi perch): 108897937
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Entry
108897937 CDS
T04895
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108897937 (lingo2b)
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
108897937 (lingo2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_5
Ig_3
LRR_1
LRR_14
Ig_2
ig
LRR_EndoS
LRR_9
LRR_Zer-1
V-set
LRRNT
DHU1_N
Sp38
Motif
Other DBs
NCBI-GeneID:
108897937
NCBI-ProteinID:
XP_018553256
UniProt:
A0A4W6F8B8
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All DBs
Position
LG19:6658791..6690331
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AA seq
622 aa
AA seq
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MTEGNVGKRDMRHPAPHHCHLILGGALLLLLASSALSCPARCECSAQSKSVSCHRKRLPT
IPEGIPIETRVLDLSKNKLRLITPDNFSSFQQLEDLDLSDNLISVVEPNSFRSQLALRSL
NFRSNLLQLVPIGVLSGLTNLTRLDLSHNRLVVLLDHAFQDLRKLTSLEVGDNELVFISQ
RAFTGLFGLQSLTLERSNLTVVPTDALAHLHSLVELRMRYLSISFLKPYSFKRLSRLRRL
EIDYWPWLDTLPPHSLHGLNLTMLFITNTNLSAFPGAALRNLPYLTHLNLSYSRIQHIHQ
GELGQLPCLLELRLQGAQLVSIEPFAFAGLKSLQLLDVSQNRLDSLERGVFASPDSLQRL
CLGGNPLVCDCRLLWLLTSHKPPSLQILDVQPECSAPEHLLGKTLRDLKEPLVSRYMTCT
KPRIGPNTTQLLMADEGQPARLSCMAEGAPRPSVVWITPHRRYITAKSSGRVEVQPDGTL
EIKAAELHDSGVYLCIASNPAGNASLSASLAVKSLGIGDRSHYSNRSSNYLTDSNSTWGN
GTVLYNMTVPIDIKTIIISTAMGCLSFLGVVVFCFLLLFAWSRGKGRHKSNFDIEYVPRK
SNGAAAEVTETSGPRRVNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacagagggcaacgtgggtaaaagagacatgcgacacccagccccgcaccactgccac
ctcatcctgggcggggccttgctgcttctcctggccagctcagctctgagctgccccgcc
cgatgtgagtgctctgcccaaagtaaatcggtcagctgccaccgcaagcgcctgcccact
atccctgaaggcatccccattgagacacgcgtcctagacctcagcaagaacaaactacgc
ctcatcacgccggacaacttctcttcattccagcagctggaggacctggacctcagtgac
aacctcatcagcgtggttgagcccaactcgtttcgttctcagctcgccctccgctcgctc
aacttccgcagtaacttgcttcagctggttcccattggcgtcctgtcgggcctgaccaac
ctcacccgcctcgacctcagccacaaccgactggtggttctcctggatcatgccttccaa
gacctgcgcaagttgacgtctcttgaagtgggcgacaacgaacttgttttcatctctcaa
cgggcctttacaggattatttggactccaaagtctgaccctggaacgttccaatctgacc
gtggtccctactgatgctctggcacatctgcacagtctggtcgaactgcgcatgcgctac
ctgagcattagttttctaaagccttactcctttaagaggttatctcgcctgcgccgacta
gagattgattactggccctggttggacacactgcctccccactcactgcacggactcaac
ctcacaatgttgttcataaccaacactaacctatctgccttccccggcgcagcgctgcgc
aacctgccctacctcacacatctcaacttgtcctacagccgaatccagcatatccatcag
ggagagctgggccaactcccatgcctgctagaactccgcctccaaggggctcagctggtt
tctatcgagccctttgcttttgcgggcctcaaatctttgcaactgctggatgtgtcacag
aaccgcctggactctctggagaggggagtgtttgcctcaccagacagcctccagaggctt
tgtctgggagggaacccattagtgtgcgactgcagattgctttggctgctcactagccac
aagcccccctctctgcagattctggacgtccagcctgagtgcagcgctcccgagcacctc
ctggggaaaactctgcgtgacctcaaagaacctctggtgtccaggtacatgacctgcacc
aagccaagaattggacccaacacgacacagctgctgatggctgatgagggtcagccagcc
cgcctgagctgcatggcagagggagcacctcgaccctctgtggtctggattacacctcac
agacgctacatcacagccaagagcagtggtagggtggaagtccaaccagatggtaccctg
gagatcaaggcagcagagctgcatgacagcggggtgtacttgtgtattgccagtaaccct
gctggcaacgctagcctgtcagcctctttagctgtgaagagcctgggcatcggggacaga
tctcactatagcaacaggagctcaaactatctgacagactctaacagcacatgggggaat
gggactgtactgtacaacatgacagtccccatagacattaagactatcatcatatctaca
gccatgggctgcctgtccttcctaggtgtggtcgtattctgcttcctgcttctgttcgcc
tggagccgagggaaaggacgccataagagcaactttgatatcgaatatgtccctcgcaaa
tccaacggggcagccgctgaggtgacagaaacaagtggcccaagacgggtcaacatgaaa
atgatttga
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