Lates calcarifer (barramundi perch): 108897948
Help
Entry
108897948 CDS
T04895
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
lcf04517
IgSF CAM signaling
lcf04530
Tight junction
lcf04810
Regulation of actin cytoskeleton
lcf05100
Bacterial invasion of epithelial cells
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108897948 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108897948 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
108897948 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108897948 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108897948 (zgc:86896)
05100 Bacterial invasion of epithelial cells
108897948 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108897948 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108897948 (zgc:86896)
Membrane trafficking [BR:
lcf04131
]
Others
Actin-binding proteins
Arp2/3 complex
108897948 (zgc:86896)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
108897948 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_HPS5
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
SH3_3
DUF2694
PEP5_VPS11_N
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
108897948
NCBI-ProteinID:
XP_018553274
UniProt:
A0A4W6D473
LinkDB
All DBs
Position
LG11:complement(21049500..21056922)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLYSFGLEPISCHAWNKDRTQIAVSPNNNKVNIYEKKGKDWVKIHELTEHSGRITGIDW
APESNRIVTCASDRNAYVWTLKDGMWKPTLVLVRINRAATCVKWSPQENKFALGSGARLI
SVCYFEKENDWWLSKHIKKPICSTVLSLAWHPNNILLAAGSADLHCRVFSAYIKDIEDKP
GPTAWGAKMPFGEVLLEHKDCGGWVHSVSFSPSGDQLAWVAHNSSITVADAAQKKEVTQL
TIDHLPLLSVLYVNPTEIVAAGHDCCPYQFTYKGPGALEFVKKLDIPKQTSKSSMSAMQH
FRNLDKRATEDDSNELDTLHQNSITQLCVVSGEKAKVEKYSSVGLDGAMVIWDFKH
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcactctacagcttcggcctggagccgatctcctgccacgcctggaacaaagacagg
acccagattgcagtgagtccaaacaacaataaggtgaacatctatgagaagaaaggcaaa
gactgggtcaaaatccacgagctgactgagcacagtggacgaatcacaggtattgactgg
gccccagagtccaaccgcattgtgacatgtgcctcagaccgcaatgcctatgtgtggact
ctgaaggatggcatgtggaaacccaccctggtcctggttcgcatcaaccgtgcagcaaca
tgtgtgaagtggtcacctcaggagaacaagtttgccctgggcagcggagctcgtctcatc
tccgtctgctactttgagaaggagaatgactggtggctgagtaagcacatcaagaagccc
atttgttccacagtcctgagtctagcctggcatcccaacaacatcctactggcagctggg
tctgcagaccttcactgcagggttttctcggcctacatcaaagacatcgaggacaaacct
ggacccactgcctggggggccaagatgccttttggggaggtgctgctggagcacaaggac
tgtggaggctgggtgcacagtgtctccttctcccccagtggagaccagctggcatgggtg
gcccacaacagcagcatcactgtggctgatgctgcccagaagaaggaggtaacccaactg
accattgaccatctgccactgctgagcgtcctctatgtcaaccccactgagattgttgct
gcgggccatgactgttgtccataccagtttacctataagggtcctggtgccctggagttt
gtgaagaagctggacattcctaagcagacctctaagagcagcatgtcagccatgcaacac
ttccgcaacctggacaagagggccactgaggatgacagcaacgagctggacacccttcac
caaaacagcatcacgcagctgtgtgttgtgtcaggggagaaagccaaagtagagaagtac
agtagtgtgggtctggatggagccatggtgatctgggactttaagcattga
DBGET
integrated database retrieval system
