Lates calcarifer (barramundi perch): 108897957
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Entry
108897957 CDS
T04895
Symbol
pax1a
Name
(RefSeq) paired box protein Pax-1a isoform X1
KO
K09382
paired box protein 1/9
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108897957 (pax1a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108897957 (pax1a)
BRITE hierarchy
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GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
108897957
NCBI-ProteinID:
XP_018553282
UniProt:
A0AAJ7QDH8
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Position
LG19:8031079..8036973
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AA seq
358 aa
AA seq
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MEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKNIREYKQNDPGIFAWEIRDRLLADGVCDKYNVPSV
SSISRILRNKIGNLSQPNQYESSKQASAQAGLPYNHIYPYSYPNTMSPKMSSPPGVPVTA
GHVSISRAWPSAHTVSNILGIRAFMDPAAIAGTEGYPPKMEEWSSVNRAAFPAAHPVNGI
DKSAIDADIKYAQPSSTLSSYVSACAYSPTNQYGVYSGSTGGYVAPGHHHWQPQSPALSH
PGSGMGMHAGEIHSPMAFKHQQAREGDRKPPSPLSKQQQQQHEDLNSVHGLSLPTSSS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacctatggagaggtgaaccagttaggcggtgtgttcgtcaatgggcgaccc
ctgcccaatgccatacggttaagaatagtggagctggcccaactcgggatcagaccttgt
gatataagccggcagctccgggtctcccacggctgcgtgagcaagatcttagcgaggtac
aacgagacgggctccatcttacccggtgccatcggtgggagcaaaccgagggtcacgacg
cctaacgtggtgaaaaatatcagggaatacaaacaaaacgaccccgggatctttgcctgg
gagatccgggacaggcttttggcagatggagtttgtgacaaatacaacgtcccgtcggtt
agttcgatcagcaggattttacgcaacaagattggaaacctctcccagcccaaccagtac
gagagcagtaagcaagcctccgcgcaggccgggctcccctacaaccacatatacccttat
tcctaccccaacaccatgtcgcctaaaatgagcagccctcctggagtacccgtgacggct
gggcatgtgagcatatccagggcctggccttctgcacacacagtcagcaacatcctcggc
atacgagcctttatggatcccgcagccattgctgggacggagggatatccaccaaaaatg
gaggagtggagtagcgtcaacagagcagctttcccagcggctcacccggtcaacgggatc
gacaaatcagccattgacgccgacataaaatacgcacagccttcatcgacactgtccagt
tatgtctcggcgtgtgcttactctcccaccaaccagtacggggtgtacagcgggtcaacg
ggcggctacgtggccccgggccatcaccactggcagccgcagagcccggccctgtcccac
ccagggagcgggatgggcatgcacgcgggggagatccactcgccgatggccttcaagcac
cagcaagcccgagaaggagacagaaaaccgcccagtcccctgagcaagcagcagcagcag
caacatgaagacttgaacagtgtgcatggactcagtctccctacctcatcatcataa
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