Lates calcarifer (barramundi perch): 108898028
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Entry
108898028 CDS
T04895
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase E
KO
K09564
peptidyl-prolyl isomerase E (cyclophilin E) [EC:
5.2.1.8
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108898028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108898028
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108898028
Enzymes [BR:
lcf01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
108898028
Spliceosome [BR:
lcf03041
]
Complex B
Other components
Prp19-related factors
108898028
Complex C
108898028
Chaperones and folding catalysts [BR:
lcf03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
108898028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
RRM_1
RRM_5
RRM_7
DUF4944
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108898028
NCBI-ProteinID:
XP_018553390
UniProt:
A0A4W6DRM2
LinkDB
All DBs
Position
LG19:7724403..7727981
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AA seq
302 aa
AA seq
DB search
MAANKRVLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDA
AAAIDNMNESELFGRTVRVNIAKPMRIKEGSSRPVWSDDDWLKKFSGKTTEEAEGEAAGG
ETTNTATQEAEPPAKKGRVNPQVYMDIKIGNKPAGRLCFLLRADIVPMTAENFRCLCTHE
KGFGYKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGRKFDDENFVLKHTAPGQLSMANS
GPNTNGSQFFITTDKTDWLDGKHVMFGELVEGMDVLRAMEAQGTKDGKPKQKVIISDCGE
YV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggccgctaacaaacgagtgctatatgttggtggtctggcagaggaggtggacgagaag
gtcctacatgcagcctttatcccatttggagacatcacagacatccagatacctttagac
tatgaaacagaaaagcacagaggatttgctttcattgagtttgaactggcagaggatgct
gcagcagctattgataacatgaatgagtctgagctttttggacggactgtccgggtcaac
atcgccaagcccatgagaatcaaagaaggttcttcgcgaccagtgtggtctgatgatgac
tggctgaagaagttctcggggaagaccacagaggaggctgagggcgaggcagcaggtgga
gaaacgaccaacacagcaacacaggaggctgaacctccagctaaaaagggcagagttaat
cctcaggtctatatggacatcaagattggcaacaaaccagcagggagactatgtttcctc
ctgcgggctgacatcgttcccatgacagcagagaacttccggtgcttgtgcacacacgag
aaaggctttggctacaagggcagcagcttccaccgcatcattcctcagtttatgtgccaa
ggaggcgacttcaccaaccacaatggcaccggcggcaagtctatctacggccggaagttc
gatgatgaaaactttgtcctcaaacacactgctccaggacagctctccatggccaactct
gggccaaacactaatggctctcagttcttcatcaccactgacaaaacagactggctggat
ggcaaacatgtgatgtttggagagctggtggaggggatggatgtgcttcgtgcaatggag
gctcaggggacaaaagatgggaagccgaagcagaaagtaatcatctcagactgcggagaa
tacgtatga
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