Lates calcarifer (barramundi perch): 108898061
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Entry
108898061 CDS
T04895
Name
(RefSeq) periplakin
KO
K10386
periplakin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108898061
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108898061
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
108898061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin_1st_PEPL
SH3_10
Plectin
SR_plectin_7
Spectrin
Motif
Other DBs
NCBI-GeneID:
108898061
NCBI-ProteinID:
XP_018553427
UniProt:
A0A4W6D4E3
LinkDB
All DBs
Position
LG11:20900323..20920023
Genome browser
AA seq
1759 aa
AA seq
DB search
MFKKKSKSTVITQPKQAAPSTELSALIEKLQKNADKVEKNIYDVEQNLNKDVSKINEGKQ
PLYQEDTNKRILNSLELLTGLDEDAVNAKRLKHPQAEMIEQDMRQLRERVMKLREDHDRI
YHLIRTEGKPSINWGNMMDEKLDNLNNKGFGQDLPSVENEVEEHNIFHSEVEALAPHIST
SGDKEYVSSLQMKYNKLLAASSARQRNLLSLRDYMQRCTNELYWMDQQAEERINYDWSDT
NLDYPARQRQYENFISKCLESKEATITKLNDDGEKLIAAEHPGKNVIEAHMEAVHADWKE
YLNLLICEENHLKHMDEYHKYHKEARDTQDLLKRMDTEVNQKYNPEFKDVYQMEGLIREL
DDQAKAMDHFDERVKALQKRSLQILPLKYRRETPQKLLPVEALCEFDADEGQILRGESYT
LLRNNGTKWDVKDAAGRKLTAPAVCFMIPPTDSEAVAISDNLASQQKAAKQKVASSKGIL
LKRFDELKKESGSGTATDKQEQQCRQLMAGLDKVISDLDKQEKAIYARVRPPLEQNRPLQ
DSADRLQDMRDIATAVSKIEPEKSSKVQEAKSFLVSNPNCASAPQLHSKVDEASKKYSKI
EQLLQCSQEKLKNSNQLETSLQNGKTFLSTYENKLAREEVAPADISSLEKTQRDLADVAS
DLRSKRSLISETEQNLRLAKSSCDNMATKFQEHCPDIERQEADVQKLNKRFNNLNRQIDT
RSQSLQRAKMAYNNYRNDYDNLNNWLSRVPNYEPRETDDLRQVETKLKNQRNLLSDIARK
ESDLNNVSKNAQLYQQAVKDYETETEKFRSILDLEDGLVPQTYKRSRLESPANAVKAEEA
AIEAKFTEVNAVNQQRLQTLEFAGSLLNQQPEIPIIQSTNVRSVQSAAPGEEPWRIRKQL
EDEIQRRDQLQKEIETIQTDIYVLEGQKPQDTIVKKELIKKVPDPQLDEEIHKVQQKLSE
ERRTTHVLENDLEVLKLKLRGLETEVKEGAQQYTVKEVLRIERDRGQEEEVRKLREDLDE
LRRHKVVKDNELIHIQKQVTLLAEEKNKEQEVITEEEVIKVQNDPQLETEYRLLLDRKQK
EMDGRKQLEDELQFLQEKLRRLEKEKAMAEEKISIKEVLKVEKDVALEREVENLRRQYED
EKTKRRSSQREKADLQRKITSLEEEKSKVVIQEKVREIVRPDPKAENEVANLRLELVEQQ
RRYKDSELQLRSLQDELTMLRNRGPQVEVKEIIKEVIKYKTDPQTERELERLRNEIVDKT
HQTEKSEMEIRQLRDEIERWKDTKPQVQTKEVVNEVLQYREDPKTKEEIETLKRKLADEQ
KKRLDLERERSAQEDKIRVRKIDLSQVREKIVQQEVVKMEEDPLLRSECDTFLQNINSEQ
KQRESLKTELYQLQRQKADLDMQLEELERERKARRDAELEIQRLRVRLNELEIRDKENRE
KVTVKQKVVLQQDPQQEKEHSILKLQLDEEKHKRILLEKELNALIQQQLTLEKMDVKERV
VRTEKVQVERDPEAEIEIENLKRTLEEEKRRRRELDQELSTITSRLSEMEFSNTKSSKEL
DYIRDESSRLQQENQRLQNEIRKLRSEIEITSKETRLITESSPREDGKNLELRLDSLQRE
LIELKGITAQKDEEIEKLQKNLAAVRMKREQRESHLRRSIVVIDPDTGKEMRPEEAYKLG
LIDWKMFVNLQSQECDWEEITVKSPKGESSVLHDRKSGKKFSIDDALRLGHITNRQLQQY
LNKEISIQEFGVMVSGKNK
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaaaagagcaagtccaccgttataacgcagccaaagcaagcggctccctcc
acagagctgagcgctctgatcgagaagctgcagaagaatgctgataaagtggagaagaac
atctatgacgttgagcagaacctcaacaaggatgtgagtaagatcaatgaggggaagcag
cccctgtatcaggaagacaccaataagagaatcctcaattctctggagctgctcactggc
ctggatgaggacgccgtcaacgccaagcgtctcaagcatccacaggctgagatgatagaa
caggacatgagacaactgcgtgagagagtgatgaagctgagagaggaccatgaccgtatc
taccacctgatccgcaccgagggcaagcccagcatcaactggggcaacatgatggatgag
aaactggacaacctgaacaacaagggctttggacaggacctgccctctgtggagaacgag
gtggaggaacacaacatcttccacagcgaggtggaggctctggctcctcacatctccacc
agcggtgacaaggaatacgtcagtagcctccagatgaagtacaacaaactgctggctgct
tccagcgctcgtcagcgtaacctgctgagcctgcgcgactacatgcagcgctgcaccaat
gagctgtactggatggaccaacaggctgaggagaggatcaactacgactggagcgacacc
aacctagactaccctgcccgccagaggcagtacgagaacttcatcagtaaatgtctggag
tccaaggaggccaccatcaccaagctgaatgatgatggagagaagctgattgctgctgag
catccagggaaaaatgttattgaggctcatatggaggcggtccatgctgactggaaggag
tacctgaacctgctcatctgtgaggaaaaccaccttaaacacatggacgagtaccacaag
taccataaggaggcacgtgacactcaggacctgctgaagcggatggacacggaggtcaac
cagaagtacaacccagagttcaaagatgtgtatcagatggaaggtctcatcagggagctg
gatgaccaagccaaggccatggaccactttgatgaaagggtaaaggctcttcagaagcgc
agcctgcagattctgcctctgaagtaccgcagagaaaccccgcagaagctgctgcccgtt
gaagctctgtgtgagtttgacgcagatgaggggcagattttgcgtggagagagttacact
ctgctccggaacaatggaaccaaatgggatgtgaaggacgcagctggacgtaaacttact
gccccggctgtctgcttcatgatcccccctaccgactccgaggcagtggccatctctgac
aacctggccagccagcaaaaagctgccaaacagaaggtagcaagcagcaaaggaattctg
ctgaaacgctttgatgagctgaagaaagagagtgggagtggcacagctacagacaagcag
gagcagcagtgccgccagctgatggctggtctggataaagtcatcagtgacctggacaaa
caggagaaagcaatttatgcacgagtgcgcccgccgctggagcagaacaggccactgcag
gacagcgctgaccgcctgcaggatatgagggatattgccacagctgtcagtaagattgaa
ccagagaaatcctctaaagtgcaggaggcaaagagcttcttggtttcaaacccaaattgt
gccagtgctcctcagcttcacagcaaggtggatgaggccagcaagaagtacagcaagatc
gagcagcttcttcagtgctctcaggagaaactgaagaattccaaccagctggagacatcc
cttcagaatggaaagacttttctgtctacctatgagaacaaactggccagggaggaggtt
gccccagctgacatctcttcactggagaaaacacagcgggatcttgcagatgttgcatca
gacctgaggtccaagaggtcattgatctctgagacagagcagaacctgcgcttggccaaa
agcagctgtgacaacatggccaccaaattccaagagcactgtcctgacattgaaaggcag
gaagccgatgtgcaaaagctcaacaagcgcttcaacaacctcaacagacagattgacacc
aggtctcagagtttgcagagagccaagatggcatataacaattatcgtaatgactatgac
aatctgaacaactggctgtctcgtgtcccaaactatgagccacgtgaaactgatgacttg
agacaagtggagactaagctgaagaatcagaggaacttgctctctgatattgcaagaaag
gagtctgacttgaacaatgtttccaaaaatgcccagctctaccagcaagctgttaaagac
tacgagactgaaactgagaagttcagatctatccttgaccttgaggatggacttgtacct
caaacatacaagcggagcagactggaatcacctgcaaatgcagtcaaggcagaggaagct
gctattgaagccaagtttactgaggtgaatgctgtgaaccagcaaaggttgcagactctt
gagtttgcaggaagtcttctcaatcagcaacctgagatccccataatccagtctacaaat
gtcagatcagtccagtctgctgccccaggagaggagccttggagaatcagaaaacagctg
gaagatgaaatccagaggagggaccaactacaaaaagagattgagaccatccagaccgac
atctatgtccttgaaggacagaagccccaggatacaattgtcaagaaggagctgatcaaa
aaggttcctgatccccagcttgatgaggagattcacaaagtccagcagaaactctcagaa
gagcgccgcactacccatgttcttgaaaatgaccttgaggtactaaagttgaagctgcgt
ggccttgagacagaggtcaaagaaggggcacagcaatacacagtgaaggaggtcctgcgt
atagaaagagaccgtggtcaggaggaggaggtgcgcaagcttcgggaagaccttgatgag
ctaagacgacacaaggtggtgaaagacaatgagctgattcatatacaaaagcaggtgaca
ctcctagctgaggagaagaacaaagaacaagaggtgatcactgaggaggaggtaatcaaa
gttcagaatgacccccaacttgaaaccgagtacaggctgctccttgacaggaagcagaag
gaaatggatggcaggaagcagctggaggatgaactgcaatttcttcaggagaagctacga
aggctggagaaggagaaggccatggcagaggagaagatttcaatcaaggaggtactgaag
gtagagaaagatgttgcccttgaaagggaggtagaaaacctcaggagacagtacgaagat
gagaagaccaaacgtagatcatcacagcgagaaaaggctgacctccagaggaaaataacc
agcctagaggaagagaagtccaaagttgttattcaggagaaagtgcgggagattgtccgc
cctgaccccaaagctgagaatgaggtggcaaatctccggcttgaacttgtggagcaacag
aggcgctataaagattccgaacttcagcttagatccctgcaggatgagctgaccatgctg
aggaacagaggacctcaagtggaggtcaaagagatcatcaaagaagtcatcaaatacaag
acagatccacagactgaaagagaactggagagacttcgcaatgaaattgtagataaaacc
caccagactgagaaatctgagatggaaatccgccaacttcgtgatgaaattgaaagatgg
aaggacaccaaaccacaagtgcagacaaaagaggtggtaaatgaagtactgcagtataga
gaagatcctaagactaaagaggagattgagactctcaaaaggaaactggctgatgaacag
aagaaacgccttgaccttgagagagaacggtcagctcaagaggacaagatcagagtaagg
aagattgatctgtctcaggtccgcgagaagattgttcagcaagaagtggtcaagatggaa
gaagaccctctcctcaggtcagagtgtgacaccttcttacaaaacatcaacagtgagcag
aaacaaagggagagcctgaaaactgagctgtaccagttgcagagacagaaggctgatcta
gatatgcaactagaagagctagagcgtgagcgtaaggcaaggcgtgatgcagaattggag
atccaaaggcttcgggtcagacttaatgaactggagatccgtgacaaagagaaccgtgag
aaggtgacagtcaaacagaaggtagtcctgcagcaggatccccagcaggagaaggaacac
tccatcctcaagctacagcttgatgaagagaagcacaaacgcatactgctggagaaagag
ttgaatgccctcatccagcagcaactcactctggagaaaatggatgtgaaggaaagagtt
gtccgcactgagaaggtccaagttgagagggacccagaggctgagattgagattgagaac
ctaaagaggactctggaggaagagaaaaggagaaggcgagaacttgaccaggagttgtcc
accatcacctccaggctctctgaaatggagttctctaacaccaagtcttctaaagaactg
gactacatccgtgatgaaagtagccgtctgcagcaagaaaaccaaaggctgcagaatgag
attcgcaagcttcggtcagagattgagatcaccagcaaagagactcgacttatcactgag
tcttcaccaagagaggatggaaagaacctggagttgaggcttgattcactacagagagaa
ctcatagaactcaaaggcataaccgcccagaaggatgaggaaattgagaagctccaaaag
aaccttgcagcagtgagaatgaagagggagcagagggagagccatctccgtaggtctatc
gttgtcattgatccagatacaggcaaagagatgcgaccagaggaggcctataagctaggg
ctgatcgactggaagatgttcgtcaatctgcagagtcaagagtgtgactgggaggagatc
acggtcaaaagtcccaagggagaatcctcggttcttcacgacagaaaatcagggaaaaag
ttctccatcgatgatgcgttgcgtcttggacacatcacaaatcgccagcttcagcagtac
ctaaataaagaaatctctatccaggagtttggtgtaatggtgtcgggcaaaaacaagtaa
DBGET
integrated database retrieval system
