Lates calcarifer (barramundi perch): 108898070
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Entry
108898070 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: serine palmitoyltransferase 2b
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00600
Sphingolipid metabolism
lcf01100
Metabolic pathways
lcf04382
Cornified envelope formation
Module
lcf_M00094
Ceramide biosynthesis
lcf_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108898070
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108898070
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108898070
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
108898070
Amino acid related enzymes [BR:
lcf01007
]
Aminotransferase (transaminase)
Class II
108898070
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Gene cluster
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Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
108898070
NCBI-ProteinID:
XP_018553437
UniProt:
A0AAJ7VH34
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Position
LG7_1:complement(17189868..17207426)
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AA seq
564 aa
AA seq
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MTESSANKLLNGDACHRTSNGKKSSKNGFVKNHCLFQQPQKYRRPRERNQNVTHNSSLYK
KPFVESFEETPLLVAVLTYMGYGILTIFGYLRDFLRHWNIEKCHVAREREEQKDFVPLYQ
DFENFYTRNLYMRIRDNWNRPICSVPGAKMDLVERVSHDYNWTFEHTGKVVKDVINMGSY
NYLGFAENSGACADAALEATQKYGVGVASTRCEIGNLDIHEELEQLVARFLGVESSMAFG
MGFATNSMNIPALTGKGCLILSDELNHASLVLGARLSGSTIRVFKHNNMQSLEKLLRDAI
VHGQPRTHRPWKKILIVVEGIYSMEGSIVRLPEVIALKKRYKAYLYLDEAHSIGALGPNG
RGVVDYFGLDPKDVDIMMGTFTKSFGAAGGYIGGKKELIDYLRRHSHSALYATSMSPPVA
QQIITSMKIIMGEDGTALGADRLRQLSENTTYFRRKLRDMGFIIYGNDDSPVVPMMLYMP
AKIGAFGREMLKRNIGTVVVGFPATPIIESRARFCISAAHTREMLDTALEAISEVGDLLQ
LKYSRREPSLPSLGWMSEESLLQD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacggagagctccgccaacaagctgcttaacggagacgcctgtcaccggacctcaaat
ggcaaaaaatcgagcaaaaatggcttcgtgaagaaccactgcctgtttcaacagccacag
aagtatcgccgccccagggagaggaaccaaaatgtcacacacaactccagcctgtacaag
aagcccttcgtggagtcgtttgaggagactcctctcctggtggccgtgctcacctacatg
ggctatggcatcctcaccatctttggctacctccgagacttcctccgccactggaacatc
gagaagtgccacgtggctcgggagagagaggagcagaaggattttgtcccactctaccag
gactttgagaacttttataccaggaacttatatatgaggatccgagacaactggaaccga
cccatctgcagcgtccctggtgccaagatggaccttgtggagagagtttcccacgactac
aattggacctttgagcacacgggtaaagtggtgaaggatgtcattaatatgggctcatac
aactacctcggctttgctgagaacagtggggcttgtgctgatgctgctcttgaagccaca
caaaagtacggcgttggagtggccagcacccgctgtgagatagggaacctggacatccac
gaggagctggaacagttggttgccaggttcctgggtgttgagtcatccatggcttttggc
atgggctttgcaaccaactccatgaacattcctgctctcactgggaagggttgtcttatc
ctgagtgacgagctgaatcatgcatcgctggtgctgggagcccgcctgtccgggtctaca
attcgggtcttcaaacacaacaacatgcaaagtctggagaaactgctgagagatgctatt
gtacatgggcagccgagaacccaccgaccctggaaaaaaatcctcattgtggtggagggc
atatacagtatggaggggtccatagtgcgtctgccagaggtcatcgcgctgaagaagcgc
tacaaggcctatctgtaccttgatgaggcccacagtatcggggccctggggcctaatggt
aggggagtagtggactactttggcctggatcccaaagatgtggacatcatgatgggaaca
ttcaccaagagcttcggtgctgcggggggatacattggaggcaaaaaggaactgattgac
tatctgcgacgccactctcacagtgcactgtatgccacctccatgtcccctcctgtggcc
cagcagataatcacttctatgaagatcatcatgggagaggacgggaccgcactgggtgct
gatcgcctcagacagctatcagagaacactacctacttccgcaggaaactccgtgacatg
ggcttcattatctatggcaacgacgactcgcctgttgtaccaatgatgctctacatgcct
gccaaaatcggggcatttggtcgggagatgttgaagaggaacatcggcacggtggtggtc
ggcttcccggcgacacccatcatcgagtcgagggcacgtttctgcatttcagctgctcat
accagagagatgcttgacactgcattggaagccatcagtgaagtgggggacctgctgcag
ctgaagtactccagacgtgaaccatcacttccctctctggggtggatgtctgaggagagc
ctgctgcaggactga
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