Lates calcarifer (barramundi perch): 108898084
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Entry
108898084 CDS
T04895
Name
(RefSeq) pro-thyrotropin-releasing hormone
KO
K05253
thyrotropin-releasing hormone
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108898084
04081 Hormone signaling
108898084
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108898084
Cytokines and neuropeptides [BR:
lcf04052
]
Neuropeptides
GPCR binding
108898084
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRH
PGA2
Motif
Other DBs
NCBI-GeneID:
108898084
NCBI-ProteinID:
XP_018553460
UniProt:
A0A4W6D6S9
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Position
LG6:complement(17978374..17980998)
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AA seq
270 aa
AA seq
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MKSTCLLILASLVLCNLAVSGGQGIPAEDETDRRTIDDIILQRAESLLLQSILKKMQDED
DRNEGFSSQPEWVTKRQHPGKRYIEDLEKRQHPGRREEDEDDQYLDVQKRQHPGKREDEM
HSFAELQKRQHPGKRATMGHISDNPVVLLSELSKRQHPGKRYLVLHSKRQHPGKRHPEED
GDGDGEWDGADGDEDLPELEKRQHPGKRFWDNSSPDLGTNSPCDVLDPTGCSKTSLLLDF
LDNINKSHAEEKRQHPGKRFALEEDLEEGE
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgacatgtcttctcatattggcttccctcgtgctctgcaacttggcggtgtct
ggaggacagggcatccccgctgaggatgagacggaccgaaggactatagacgacatcata
ctacagagagcagagagtctcctgttacagtccattctcaaaaagatgcaggatgaagac
gacagaaacgagggattttcatctcagccagaatgggtgacaaaacgacagcatcccggc
aagagatacatcgaggatttggagaagcggcagcatccggggaggagagaagaagacgag
gacgatcagtacttggacgttcaaaagagacagcacccgggaaaacgcgaagacgaaatg
cactcgttcgcagagctccagaaaagacagcacccggggaagcgcgccacgatgggacac
atttctgacaaccccgtcgtactcctgagtgaactttctaaacgacagcaccccggcaag
cgctacctggtgctgcacagcaaacgccagcacccaggtaagcgccatcccgaggaggac
ggggacggcgacggggaatgggatggcgcggatggagacgaagacctcccggagttggaa
aagcgtcaacaccccggaaaacggttttgggataactcgagtccggatttgggcacaaac
agtccgtgtgatgtattggaccctacgggctgtagcaagaccagcctgctgctcgacttt
ttagacaacattaacaagagtcacgccgaggagaagagacaacacccgggtaaaaggttt
gcactcgaggaggatttagaggagggggagtag
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