Lates calcarifer (barramundi perch): 108898110
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Entry
108898110 CDS
T04895
Symbol
mylipa
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MYLIP-A
KO
K10637
E3 ubiquitin-protein ligase MYLIP [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108898110 (mylipa)
04121 Ubiquitin system [BR:
lcf04121
]
108898110 (mylipa)
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108898110 (mylipa)
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
108898110 (mylipa)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108898110 (mylipa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_N
FERM_M
zf-C3HC4_3
FERM_C
Prok-RING_4
RA_2
TerY_C
Motif
Other DBs
NCBI-GeneID:
108898110
NCBI-ProteinID:
XP_018553491
UniProt:
A0AAJ7QDV3
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Position
LG3:complement(12137321..12154857)
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AA seq
484 aa
AA seq
DB search
MLCHVTRPDSVVMEVEVDAKANGEDCLNKVCRKLGIIEVDYFGLQFTGSKGENLWLNLRN
RICQQMDNLTPCRLRLRVKFFVEPHLILQEQTRHIFFMHVKEDLHNGHLRMGSEQAEELS
ALLAQAEFGDYNQNTAQYWYSELCGEEPSTATINSIISRHKALEGLSQGSVEYQALQLVS
SLEHYGVEWHWARDANGQRLAIGVGPXGIAICKEDFSLVNRVSYPVIQIATQSGKSVYLT
VTKDTNDSVVLLFKLISNRAASGLYRAITETHAFYRCDTVTNAVMMQYSRDFKGHLASLF
LNENINLGKKYVFDIRRTSKEVYDHARRALYNSGVVDLVSRSGSEERSSPSRSPSRDNNQ
QDEGLDCGSCQQSRALQERLQKLREALLCMLCCEEEIDAAFCPCGHMVCCQTCANQLQLC
PVCRSEVEHVQHVYLPTCTSLLNLTVTTDNHQHHSSSIPAPIHRDTASPHTCPATEYEQK
IYHT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgctctgccacgttactcgtccggattccgtggtgatggaagtggaagttgatgcgaag
gcgaacggtgaagactgtctgaataaggtttgcagaaagttgggtataattgaagtggac
tactttgggctgcagttcacaggcagcaaaggagagaacctgtggctgaatctgagaaat
cgaatctgccagcagatggataacttgacgccctgtcggctgaggctgcgggtgaagttc
ttcgtggagccccatcttattctgcaggaacagacgagacacattttcttcatgcacgtt
aaggaggaccttcataacggtcacctacgtatgggctcggaacaagcggaggagctgagc
gcgctgctggcacaggctgagtttggcgactacaaccaaaacacagcccagtactggtac
tcagagctgtgtggagaggagcccagcactgctactatcaacagcatcatatccagacat
aaagctctagagggtttgagccagggctcggtggagtatcaggccctgcagctggtctcg
tctctggagcattacggcgtggagtggcactgggctcgcgatgcaaacggacagcggttg
gccataggagtcggcccgnagggcatcgccatctgcaaagaggacttcagcttagtcaac
agagtgagctatcccgtcattcagattgctacccagtcagggaaaagtgtgtacctgaca
gttaccaaggacacgaacgacagcgtggtgcttctcttcaagcttattagtaaccgagca
gccagcggtctgtaccgggccatcactgagacccacgccttctacaggtgcgacacagta
acaaatgcagtgatgatgcagtacagtagagactttaaaggtcacctagcttcactcttc
ctcaacgaaaacatcaacctgggcaagaaatacgtctttgacatccggcgcacctccaag
gaagtgtacgaccacgcccgccgcgcgctctacaactccggtgtggtggacctggtgtcg
cgctccggcagcgaggaacgctcctctccttcgcgctccccgagcagggacaacaaccag
caggacgaggggctggactgcggcagctgccaacagagccgggccctgcaggagaggctg
cagaagctcagggaggctcttctgtgcatgctgtgctgcgaggaggagatagacgccgcg
ttctgcccctgcggccatatggtgtgctgccagacgtgcgcaaatcagcttcagttgtgt
cccgtgtgtcggtccgaggtggagcacgtacagcacgtctacctgcccacctgcaccagc
ctgctgaacctgacggtgacgaccgacaaccaccagcaccacagcagcagcatcccggca
cccatccacagggacacggcctctcctcacacctgccccgccacagagtacgaacagaag
atctaccacacataa
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