KEGG   Lates calcarifer (barramundi perch): 108898112
Entry
108898112         CDS       T04895                                 
Symbol
tdp2b
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
  KO
K19619  tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108898112 (tdp2b)
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     108898112 (tdp2b)
SSDB
Motif
Pfam: UBA_4 Exo_endo_phos Exo_endo_phos2 UBA_8 TAP_C
Other DBs
NCBI-GeneID: 108898112
NCBI-ProteinID: XP_018553499
UniProt: A0A4W6DXR5
LinkDB
Position
LG3:complement(11682669..11685053)
AA seq 361 aa
MASTSESDKPSVSDVEENRTRLCDEFAAIAGTDSAVAQCYLAENEWEMERALNSFFEADL
ERVFEEEDSPERGTSPKPKRQKVDEKATGDCIDLTEESPVTSHKPSEEDDGKLSVISWNV
DGLDTDNLAERARGLCSYLVLYTPDVVFLQELIPPYVQYLKKRAVSYLIIEGGEEGYFTG
MMLKRSRVKLLESETVTYPTTQMMRNLLVAQVDFKGQKLCLMTSHLESCKGHAEERMKQL
RVVMQRMGEAADDVTVLFGGDTNLRDPEVAKVGLPSSVCDVWERLGKQEHCRYTWDTKAN
NNKTVPYVSRCRFDRVYFRPATKDGVPRLAPDHMALVGLEKLDCGRYTSDHWGIYCSFSA
G
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcttctacatccgagtcggacaaaccgtcagtttctgatgtggaggaaaacagaact
cgtctctgcgatgagtttgctgcaatagcgggaacggacagcgctgtggctcagtgctac
ctggctgaaaatgagtgggagatggagagagctttgaactcattctttgaggcagacctg
gagagagtatttgaagaggaagattctccagagagaggcactagccctaaacccaaaaga
cagaaggttgatgaaaaggctacaggagactgcatagatctgaccgaagagagtcctgtc
acctcacacaaaccctcagaggaagatgatggtaaactgtccgtgatctcctggaacgtt
gacggacttgatacagacaaccttgcagagcgtgccagaggcctgtgctcctacttagtc
ttatatactcctgatgtggtgttcctacaggagctcattccaccttatgtccagtatctg
aagaaacgggctgtcagctacttgatcattgaaggtggtgaagagggttacttcactggg
atgatgctgaagaggtcacgagtcaaactgctggagagcgagacagtaacttaccccacc
acgcagatgatgaggaatctgcttgtagctcaagtggatttcaaaggccagaagctttgt
ctgatgacgtcccaccttgagagctgtaagggccatgctgaggagcggatgaagcagctg
cgagtggtgatgcagaggatgggagaggcagcagatgatgtcaccgtcctgtttggaggg
gacacaaacctgagagaccctgaggtggcaaaggtgggcctgccctccagtgtctgtgat
gtctgggagcgactgggcaagcaggagcactgccgctacacatgggacaccaaagccaac
aacaacaagaccgttccctatgtcagtcgctgccgcttcgaccgggtctacttccgcccg
gcaaccaaagatggagtcccacgtctggcccccgaccacatggccctggtggggctggag
aagctggactgtggacgttacactagtgatcactggggaatctactgcagcttctctgcc
gggtag

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