Lates calcarifer (barramundi perch): 108898171
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Entry
108898171 CDS
T04895
Name
(RefSeq) ras/Rap GTPase-activating protein SynGAP isoform X2
KO
K17631
Ras/Rap GTPase-activating protein SynGAP
Organism
lcf
Lates calcarifer (barramundi perch)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAB2P_C
PH_RASGAP
RasGAP
C2
PH
PH_2
Motif
Other DBs
NCBI-GeneID:
108898171
NCBI-ProteinID:
XP_018553578
UniProt:
A0A4W6E142
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Position
LG3:12711562..12751205
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AA seq
1285 aa
AA seq
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MDTSSKTWLPHQSQFGLVGQAEVCCGGPGVLTPNQSRRASFASARQSSMETPPNATPQPF
RQPSFLNRRLKGSIKRAKSQPKLDRTSSFRQMILPRFRSADQERTRLMQSFKESHSHESL
LSPSSAAEALDLVLDEEAIIKPVHSSILGQEYCFEVTTSSGTKCFACRSASERDKWIENL
QRAVKPNKDNSRRVDNVLKLWIIEARDLPAKKRYYCELCLDDMLYARTTSKPRTDTVFWG
EHFEFNNLPTIRSLRLHLYKETDKKRRKEKSTYLGLVSIPISSITGRQFVEQWYPVIQSS
VLAKSGGVGSAKVINASLRVKSRYQTMNILPMELYKEFAEYITNNYRTLCAVLEPLLSVK
SKEEVAFALVHILQSTGKTKEFLSDMAMCEVDRFMDREHLIFRENTLATKAVEEYLKLIG
HRYLKDAIGDFIRALYESEENCEVDPMRVPPSVLADHQANLRMCCELLLCKIINSLCIFP
RELKEVFASWRARCAERGREDLADSLISSSLFLRFMCPAIMSPSLFNLMQEYPAERTSRT
LTLIAKVMQNLASFSKFGPKEEYMYFMNEFLEMEWGSMQQFLYEISNMDTGGNAGGFEGY
IDLGRELSMLHSLLWEVMGQLSKDAILKLGPLPRLLNDISVALRNPQLHMPTNHQPDRPK
DRLFSRPSFNRLMSSDFQSLMMRDLNSSIDISRLPSPTTGVSAVESLSSNLNMRRHAERD
LRSSREVFYVTRPPLARSSPAYCTSSSDITEPDPKVHSVNKSVSMMDLQDSRMNSISNLN
SVGDMLTSSQASIAGLGHSFGNLGGPLRMGGHMPAGSAGSGLRLSQMGHIGGPTESISQQ
QQQAAAAMHFPLSFQNPLFHLAAQNSPAQSQPPPPPLLLAPEPENGHHDYAPAFGNSAFS
RSEDLSALRSQSSLVQPSIVHSHSYSDDFTRQNQNNDYAWHQLSLQVQESLQQQHLMGVT
SQTATGTGTPASLATPPTTVHPVRQSSIAPPQHLKSQRSINTPATATPPKVRPQSRNLLL
DSSDTNYSGSQPKQRQTQQPQQQQQQQQQQQQSQQQQQQETQLSVTDSPAPGLPYQTSSA
KENQGPSAAAEESTDTPTKSTKKPQQSQLQPPQQHLLKPVVNKQGSQTTLNTPALNERTV
AWVSNMPHLSADIESLRPDREGQLKEYSKSMDESRLERVREYEEEIHSLKERLKMSHRKL
EEYEQRLLSQEQQTNKILQQYQSRLEDSERRLKQQQLEKDSQIKGIISRLMAVEDELRGG
AIPDIKPRILTDQSISQGYGGHPGS
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggacacatcttcaaagacgtggctgccgcatcagagtcagtttgggttggttggtcaa
gcggaggtttgctgtggcggaccgggagttttaaccccaaaccaatctcgcagggcaagt
tttgcctctgcaagacagtcaagcatggaaactcctcccaatgccaccccacagcccttc
agacagccgagttttctcaaccgaaggttgaagggttccatcaagagggccaaaagtcag
cccaaactggaccggaccagcagcttcagacaaatgattttgcctcggtttcgtagtgct
gaccaagagaggactcgcttgatgcaaagcttcaaggaatcccactcccatgagtcccta
ctttctcctagcagtgctgcagaggctttggacttagttttggatgaggaggccataatc
aaacctgttcactcaagcattttagggcaagagtactgctttgaggtgaccaccagttca
gggacaaaatgttttgcctgccgctcagcttcagaaagagacaagtggattgagaatctg
caacgagctgttaaacctaacaaggacaacagcagacgggtggacaatgtgctcaagttg
tggatcattgaagctcgagaccttccagcaaagaaacgctactattgtgagctgtgtctg
gatgacatgctgtacgcacgcaccaccagcaaaccccggaccgacaccgtcttctggggc
gagcattttgaatttaacaatttgcctaccattcgtagccttcgcttacacctctacaag
gaaacagacaaaaaaagacgcaaggaaaaaagcacataccttggccttgtcagcatcccc
atttccagcatcacgggccggcagtttgtggagcaatggtacccggtgatacagtccagt
gttttggccaaaagtggtggtgttggaagtgccaaagtcatcaatgcctcgctgcgtgtt
aagtctcgctaccagacaatgaacatcctccctatggagctgtacaaggaattcgctgag
tacatcaccaacaactaccgaacactgtgtgctgttctggagccgctgttgagtgtgaaa
agcaaagaggaggtggcgtttgctctggtgcacatactccaaagcacagggaagacaaag
gaattcctgtctgacatggcgatgtgtgaggtggatcgattcatggaccgtgagcacttg
atctttcgggagaacacgctcgctactaaggctgtggaagagtacctcaaactgataggt
cacagatacctcaaggatgctataggtgacttcattcgagccttatatgagtctgaggag
aactgtgaggtggaccccatgcgtgtcccgccatcagtccttgctgaccaccaagccaac
cttcgcatgtgctgcgagctgttactctgcaagattatcaactctctctgcatatttcct
cgggagctgaaggaagtttttgcctcatggagagccagatgtgctgagcgtggaagagag
gatctcgctgacagcctcatcagctcctccctgttccttcgcttcatgtgcccagccatc
atgtccccctccctgttcaacctaatgcaggagtaccccgctgaacgcacgtcccgcaca
ctcacactcatagccaaggtgatgcagaacctggccagcttcagcaaatttggacccaag
gaggaatacatgtacttcatgaatgagttcctggagatggagtggggctccatgcagcag
tttctttatgagatttccaacatggacactggaggaaacgccgggggctttgagggctac
attgacctcggcagagagttgtcgatgcttcacagtttactgtgggaagtcatgggccag
ctcagcaaggatgctattctcaaactcggaccccttccacggctgctgaatgacatcagt
gtcgccttgaggaacccacagctccacatgcctacaaatcaccaaccagaccgaccgaag
gacagactcttctcgcgaccatctttcaatcgtctcatgtcctctgacttccaaagcctt
atgatgcgtgacttaaacagttcaatagacatctctcgcctgccatctccaacaactgga
gtatccgctgtagaatccctctcatcgaatctgaacatgaggcgtcacgcagaacgggac
cttcgctcgtcgagggaggttttctacgtaactcgtccaccgctggctcgatccagccct
gcatactgcacgagcagttcggacattaccgagcctgatccaaaggtccacagtgtgaat
aaaagtgtttctatgatggacctccaggactcccgtatgaacagcatttccaacctgaac
tctgtgggagacatgctcacctcctctcaagcctccatcgctggcctcggacacagcttc
gggaacctcggcggtcctcttcgtatgggagggcatatgccggcgggctcagcgggctcc
ggtctgaggctgagccagatgggccacatagggggtcccaccgaatccatctcccaacag
caacagcaggcagcagcagccatgcacttccccctgtctttccagaacccgctattccat
ctggctgcccagaactccccagctcagtctcagcctcctccccctcctcttctcctcgct
cccgagcctgagaatggccaccacgactatgcacccgcctttggcaacagtgctttctcc
cgcagcgaggacttgtccgccctgcggtcacagagcagtctggtgcagcccagcattgtc
cactctcacagttacagtgatgatttcacccggcagaatcagaataacgactacgcctgg
caccagctgtcactgcaagtgcaggagtctctccagcagcagcacctgatgggagtcaca
tctcaaacagccactgggacgggcaccccggcctctttggctacacctcccaccacagtt
catcctgtccgccagtcatccattgcccctccacaacacctcaagtcccagcggtccatt
aacactccagctaccgccacgcctccaaaggttcgcccgcagagcaggaacctcctcctc
gactcctctgacacaaattacagcggcagccagccaaaacagcgccaaactcagcagccg
cagcaacagcaacaacagcagcagcagcaacagcagtcccaacagcagcaacagcaggag
acacagctgtcggtgacggacagcccagctcctgggctcccgtaccagacgagctccgcc
aaagagaaccagggcccatcagcggctgcagaggagtcgacggacactccaacaaaaagc
accaagaagcctcaacagtcacaactgcagcctccacagcagcatctgctcaagccagtt
gtcaataaacagggttctcagacgacgttgaacaccccagccctcaacgagcggacagtc
gcctgggtgtccaacatgccacatctctctgctgacattgagagcttgcggccggaccgt
gagggtcagctgaaagagtattcaaagagcatggatgagtcacgattagagagggtcaga
gaatacgaagaagagatacactccttgaaagaacggctgaagatgtctcatcgcaagctt
gaggaatacgagcagagacttctgtcgcaggaacagcagacaaacaagatcctgcagcag
tatcagagccgcctggaggacagcgagcgtcgcctaaagcagcagcaactggagaaggac
tctcaaatcaaaggcatcatcagcagactcatggctgtggaagatgagctgagagggggt
gccattcctgatattaagcctcgaatcctcacagaccagtctatcagccagggctatggt
ggccacccaggatcctga
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integrated database retrieval system
