Lates calcarifer (barramundi perch): 108898175
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Entry
108898175 CDS
T04895
Name
(RefSeq) zinc finger and BTB domain-containing protein 10 isoform X1
KO
K10497
zinc finger and BTB domain-containing protein 10
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108898175
04121 Ubiquitin system [BR:
lcf04121
]
108898175
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
108898175
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108898175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
BTB_SANBR
BTB_KLHL33
zf-C2H2
zf-H2C2_5
zf-C2H2_16
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108898175
NCBI-ProteinID:
XP_018553588
UniProt:
A0A4W6DWF3
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Position
LG3:complement(11843717..11866252)
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AA seq
744 aa
AA seq
DB search
MSGERNRRSLAFRGGGLAGLTGSSGIGGGNCNNREAPACQDRHFNGNRPDQEEDRDLGAK
GPSQRRVEGAGSVSDSTEPEAEEEEDPEGGSWAAGDGDDRVEGSVEGDDGSREGSSWTAG
NGPSNADGQESGSGATGGETGSRKSGVEMRPQTLLQKHSLFHASWLQEFPWLKFCQETGL
MSCSWCHNIATKNSDELVKGSRNYKRALLLRHHLSSEHGRNDPTKQETMRPSDSASPSTN
CSEEDYRNKPNENSYCYQLLQELDKQRKSGILCDVNIVVSGQVFRAHKNILVAGSRYFKT
LYCLTKSEAQDQATVTHLDVAAVQGFSVILDFLYSGNLLLTSQNAIEVMSVASYLQMTEV
VQSCRAFIKDALNISIKQEAPDSVVVDYNKRQMVAKEGQRSLDRKPSNFWATSILSKLSI
KASNNQGKEAMEEDDESGRVKEETSDIEVTVVGSEGCALVTPGASGSWAHHNENSSDSAE
TNETRAVSGQAQVFVWNEPATGGAAAAPAAIKREAPDAAAGSGRRKKQTTTRRFVYNFPP
EPEEGFDEGMFIQPSASYPREDFSSLSENAELANQIQYSIIQDLQQGESWENGESSHLAL
NKLKCPHCNYIAKHRRTLKRHLIIHSGVRSFSCDICGKLFTRREHVKRHSLVHKKDKKYK
CMVCKKIFMLAASVGIRHGSRRYGVCADCADSHQATQEGLEGMEFPRDEDFEGEEGEDLE
GEEPTDNDQSNWGEGNTGAAPEKD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtgagagaaaccgcaggtcgttggctttccgaggaggtggattagctgggtta
acgggttccagcggtatcggtggggggaactgtaacaacagggaggccccggcctgtcaa
gaccgacattttaacgggaacaggccggatcaagaggaggacagggatctgggggcgaaa
ggaccatcgcagaggagagtggagggcgctgggtctgtcagcgatagcacggaacccgag
gcggaggaagaagaggacccggaagggggcagctgggcagccggggacggcgacgatcgt
gtggaaggctcggtggaaggggacgacgggtccagggaggggagtagctggacagcgggg
aacggtcccagcaacgccgacggccaggagtcgggaagcggtgccacaggaggcgagacg
ggatccaggaaatctggggtagagatgagaccgcagacgttgcttcagaaacactcacta
ttccatgcttcgtggttgcaagagtttccatggctcaaattttgccaggagacgggactc
atgtcctgttcttggtgtcacaacattgccactaaaaacagcgacgagcttgtcaaaggc
agtcgcaactacaaacgggccttgctgctgagacatcacctgtcctctgagcacgggaga
aatgatcccaccaaacaggagacaatgaggccctcagacagcgccagcccctccactaac
tgctcagaggaagattaccgcaacaagcccaatgagaactcctactgttaccagcttctt
caggagctggacaagcaacgcaaaagtggcatcctgtgtgacgtcaacatagtcgtctcg
ggccaggtgttccgtgcacacaagaacatcctggtggcgggcagccgctacttcaaaacc
ctctactgtctgaccaagagtgaggctcaggaccaggccacggtcacgcacctggatgtt
gctgctgtgcagggcttctcagttatcctcgattttctctactccgggaatctgctgctt
acaagccaaaatgccattgaggtgatgtctgttgctagttacctccagatgacagaagtt
gtacagtcatgtagggcttttataaaggacgccctgaatatcagcatcaagcaggaagcc
cctgattcagtggtggtggactacaacaagaggcagatggtggccaaagagggacagaga
agtctggaccgaaagccaagcaacttctgggccacaagcatcctgtcgaagctgtcaatc
aaggcaagcaacaaccaaggaaaagaagcaatggaagaagacgatgaaagcggcagggtg
aaggaggagaccagcgatatagaggtgacagtggtcgggagtgagggctgtgccctggtg
acccctggagcctctggtagctgggcccaccacaacgagaactcctctgattcagcagag
accaatgaaacacgggcggtgagcggccaggcgcaggtcttcgtctggaacgagcctgcc
acaggtggcgccgcagcagcacccgcagcaataaaaagagaggcaccggatgctgcggct
ggaagcggacgaaggaaaaaacagaccaccacacggcgctttgtctacaacttcccacca
gaacctgaagagggattcgatgaggggatgttcatccagccctcagcctcctaccccaga
gaggacttctcctcgctctctgaaaatgctgagctggccaatcagatccagtatagcatc
atccaagacttacagcaaggggagtcctgggagaatggcgagtcctcacacctagccctc
aataagctcaagtgcccccactgtaactacatcgccaagcaccggcgcacgctcaagagg
cacctgatcatccactcaggcgtgcgctccttcagttgcgacatctgtggcaagctgttc
acccgccgcgagcacgtaaagagacattccctggtgcacaagaaggacaaaaagtacaag
tgcatggtgtgcaagaagatcttcatgcttgcagccagcgttggtatccgccacggctcg
cggcgctacggtgtgtgtgcggactgcgctgattcgcaccaggccactcaggagggcctg
gagggcatggagtttcctcgcgatgaagacttcgaaggcgaggaaggggaggacctggag
ggggaggagcctaccgacaacgaccaatcaaattggggcgagggcaacactggtgctgcc
ccagaaaaggactaa
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