Lates calcarifer (barramundi perch): 108898184
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Entry
108898184 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: V-type proton ATPase subunit C 1-B
KO
K02148
V-type H+-transporting ATPase subunit C
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00190
Oxidative phosphorylation
lcf01100
Metabolic pathways
lcf04145
Phagosome
lcf04150
mTOR signaling pathway
Module
lcf_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
108898184
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108898184
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108898184
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Gene cluster
GFIT
Motif
Pfam:
V-ATPase_C
Folliculin
NRIP1_repr_1
Motif
Other DBs
NCBI-GeneID:
108898184
NCBI-ProteinID:
XP_050922679
UniProt:
A0AAJ8DL03
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Position
LG3:complement(11410977..11418485)
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AA seq
382 aa
AA seq
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MTEFWLISAPGEKTCQQTWDKMMAATSRTNNLSTNNKFNIPDLKVGTLDVLVGLSDELAK
LDTFVESVVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKN
ISEIISKQATQIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKEDFVLDSE
YLITMLVVVPKTSYADWQKTYETLAEMVVPRSTKLLFEDNDSGLFSVTLFRKAVDDFKHK
ARENKFTVRDFQYNEEEMKADKEEMTRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHIKAL
RVFVESVLRYGLPVNFQAMLLQPNKKNMKKLREVLYDLYKHLDSSAAIIDASMDIPGLNL
SQQEYYPYVYYKIDCNLLDFKV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacagaattctggttgatctccgctccgggggagaagacatgccagcagacctgggac
aagatgatggccgccacttcgcgcaccaacaatctctcgaccaacaacaagttcaacatc
cctgacctcaaggtcggaacattagacgtcttagtgggtctgtcggatgagctggctaaa
ctggacacttttgtggaaagcgtggtgaagaaggtcgctcagtacatggctgatgttctg
gaggacagccgagacaaagtccaggagaatctactggccaatggagttgacctggtcact
tatatcaccagatttcagtgggacatggcgaagtatccaatcaaacagtccctgaaaaac
atctctgagatcatctccaagcaagcaactcagatagacaacgacctgaaggccagagct
tcagcctacaacaatctgaagggaaatctacagaatctggagaggaagaatgcggggagc
ttgttgaccaggagtctggctgacatagtgaagaaagaggactttgtactggactcagag
tacctgattaccatgctggtagtcgtcccgaagacaagctacgctgactggcagaagacg
tatgaaacactggcagagatggtcgtaccacgctctactaagctgctatttgaagacaac
gacagtggtctgttcagtgtcactctcttcaggaaggctgtggatgacttcaagcacaag
gccagggaaaacaagtttacagtgcgtgatttccagtacaatgaggaggagatgaaggca
gacaaggaagagatgactcgtttgtccactgacaagaagaaacagtttgggcctttggta
cgatggctgaaagtgaatttcagtgaagccttcatcgcgtggattcacataaaggctctg
cgcgtgtttgtggagtcagtattgagatacgggctgccagtcaacttccaggccatgctg
cttcagcccaacaagaagaacatgaagaagctgagagaggtgctgtacgacctgtacaaa
cacctggacagcagtgctgcgatcatcgatgcctctatggacatcccaggtctgaatctg
agccagcaggagtactacccctacgtttactacaagattgactgcaacctgctggacttc
aaagtctag
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