Lates calcarifer (barramundi perch): 108898241
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Entry
108898241 CDS
T04895
Name
(RefSeq) F-box/SPRY domain-containing protein 1
KO
K10319
F-box protein 45
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108898241
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108898241
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SPRY
F-box-like
F-box
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
108898241
NCBI-ProteinID:
XP_018553686
UniProt:
A0A4W6C834
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Position
LG24:578600..581688
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AA seq
289 aa
AA seq
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MSGAVGGGGGSSCLGAAAAASCSSAGSPYSAAAGGGAGVAGRLPARVLEHVFSYLELSDL
MRCALVCRNWNKTLADENSEVWRSLCTRTLSDEALRSDILCNLPTYKGKLKAFQHALSSH
DCSRNVYVKKNGFTLHRNPIAQSTDGARGKIGFSEGRHAWEIWWEGPLGTVAVIGIATKR
ASMQCQGYVALLGSDDQSWGWNLVDNNLLHNGEVNGNFPQCNNAPKYQIGERIRVILDMD
DKTLAFERGFEFLGVAFRGLPKACLFPAVSAVYGNTEVTMVYLGKPLDG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagctgtcggtggaggaggaggctcctcctgtctgggcgcagcagcggcagcc
agttgcagctccgctggctctccctactctgctgcagccggaggaggcgcaggggtggcc
gggaggctgccggcccgggttctggagcatgttttttcctatctggagctgtctgacttg
atgcggtgcgcgctggtctgccggaactggaacaaaaccctggcggatgaaaatagcgag
gtgtggcgcagcctctgcacccggactctgagtgatgaggctctgcgttctgacatcctg
tgcaacctgcccacctacaagggcaaactcaaagcctttcaacacgctctgagctcccac
gactgctcccgcaatgtttatgtgaagaagaacggcttcaccctgcaccgtaaccccatc
gcccagagcacagacggtgcccgtggaaagatcggcttttcagaggggcggcacgcctgg
gagatctggtgggagggccccctcggcaccgtggcagtgataggcatcgccacgaagcgg
gcgtcaatgcagtgccagggctacgtggccctgctgggcagtgacgaccagagctggggc
tggaacctggtcgacaacaacctgctgcataatggggaggttaatggaaatttcccacaa
tgcaacaatgcacccaaataccagattggcgagagaatccgggtaattctagacatggac
gacaagacattagccttcgagagaggttttgagtttcttggagtagcgtttcgtggactg
cccaaagcctgcctgttccctgctgtctccgcagtgtatggtaacactgaagtcaccatg
gtgtacctgggaaaacctctggatggttag
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