Lates calcarifer (barramundi perch): 108898244
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Entry
108898244 CDS
T04895
Name
(RefSeq) solute carrier family 22 member 17
KO
K08213
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 17
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108898244
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
108898244
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
108898244
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Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
108898244
NCBI-ProteinID:
XP_018553689
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Position
LG24:125502..140034
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AA seq
581 aa
AA seq
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MMTSPDSPPVVSPSPCPAPPPSLPSSPVPSSPAPSSSSLPAPPSLPPTGEVMVLALGRKK
QRVLIALSILPNLFLAFLLSSDPLITLSPPHHCHLPGPLLSLEALNTSLPWEKRERLGEG
GGPSQCKQYVNGSQTAVVDCESGWDYNVTEGLRNNIVTEWDLVCGQYWLVPVEEVCFILG
VLTGCLGLGYAADRLGRSKALLTSLTLTVVFGVLVCVSPYPSIFIVMRFCLAAASAGVYL
TLYITRLELCEPSLRLLVTMLAGLMTVAGELLLLAVALGCQSWRGLLGAGAAPLTLFLSY
GIPGVFPESPRWLLLSERSADMNSFSERRNSNRDVRDDESFTELDSESALFSHPHLSFPE
LFHSRNIWKNMCVLGFTSFISHGISHCYSSFRGDVRGTAPSFYWMYLLSVCAGGGAWLLL
WVTVDRCGRRGILLLSMTMTGLASLILLGLMEYLSETAITVFSVLGLFSSQATASLCILF
TAEIMPTIIRGSGVGAVLALGCVGRLSSPLMDLRNHYGYFLHHVVYSSLALLAVLSILLL
PESKRKPLPQTLADGEQYRRPPLGRRRRDNVPLLATPNPET
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgatgacatccccagactcacccccagtggtgtccccctccccatgccctgctccccct
ccatccctcccctcctcccctgtgccctcctccccggccccgtcctcctcctccctcccc
gcccctccctcactgcctcccacaggggaggtgatggtgctggctctgggcaggaagaag
cagcgggtgctgatcgctctctccatcctgcccaacctgttcctggccttcctgctctcc
tcagaccccctcatcaccctgtccccgccccaccattgccacctgccagggcccctgctg
tccctagaggcattgaacacctccctcccctgggagaagagggagaggctgggggagggc
gggggcccgtcccagtgtaagcaatacgtgaacgggagccagacggctgtggtggactgt
gagtctggctgggactacaacgttactgaggggctgaggaacaacatcgtcactgagtgg
gatctggtgtgtggtcagtattggctggtcccagtggaggaggtgtgtttcatcctgggt
gtcctgactggctgtctgggtctgggctatgctgcagacaggctgggcaggtctaaggct
ctgctgacctccctgaccctgacggtggtgtttggggtgctggtgtgcgtctctccgtac
ccctccatcttcattgtcatgcgtttctgtctggctgcagccagtgctggagtctacctc
accctgtacatcacccgtctggagctgtgtgaaccctctctgaggctcctggtcaccatg
ttggctggcctgatgaccgtggctggagagctgctgctgctggccgtggctctgggctgt
cagtcctggaggggcctgcttggagccggggctgccccgctgaccctgttcctcagctac
gggattcccggggtgtttccagagtcccctcgctggctccttctgtcagagcgatctgca
gacatgaactcattcagcgagagaagaaactccaacagagacgtgagggatgacgagagc
ttcacagagctggactcagagtcggccctattctcacacccccacctgtccttccccgag
ctcttccacagcaggaacatctggaagaacatgtgtgtgctgggcttcacttcattcatc
tctcacggtatcagtcactgctacagctccttcagaggtgacgtcagaggcactgccccc
agcttctattggatgtacctgctgtctgtgtgtgcagggggtggggcctggctgctgctc
tgggtgactgtggacaggtgcggtcgccgtggcatcctgctcctctccatgacgatgacg
gggcttgcctctctgatcctcctgggactcatggagtatctcagtgaaacggccatcaca
gttttctctgtgctgggtctgttctcctctcaggccactgcctccctctgcatcctcttc
actgcagagatcatgcccaccatcatcaggggcagtggtgtgggtgccgtcctcgccctg
ggctgtgtaggccgcctcagctcgccactcatggacctcaggaaccactatggctacttc
ctgcaccatgtggtctactcatccctggccctgctggccgtgctgtccattctgctgctg
cccgagagcaagaggaagcccctgccgcagacactggccgacggcgagcagtacagacgc
cccccactgggcaggaggaggagggacaatgtgccgctgctcgccacgcccaacccagag
acctaa
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