Lates calcarifer (barramundi perch): 108898247
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Entry
108898247 CDS
T04895
Name
(RefSeq) transforming growth factor beta activator LRRC33
KO
K26317
transforming growth factor beta activator LRRC33
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108898247
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_EndoS
LRR_NXF1-5
LSM
Motif
Other DBs
NCBI-GeneID:
108898247
NCBI-ProteinID:
XP_018553691
UniProt:
A0A4W6C6F1
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Position
LG24:588671..594169
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AA seq
683 aa
AA seq
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MPVHSLTPILLCLLPVWIILTPGSCHPQLSPCQLIQRSALCNNANLSSVPSGLPHNTEEL
QLNFNHIQTLQDDSFLGYPSLKTLSFACNSLEKLESNTFQNSKLLESLNLANNKLYIGYA
ETSYALKKLPGLKALDLSENELHDEFVTILLQNLTSIEYLNLSGNLLQRLDETSFSDLHQ
LKELDLQRNIMFELDGAFNSNPKLQRLNLAFNYLPCLTDFHMTQLVVLNVSHNFIEWFIS
NDLNETFQLETLDLSNNKLLFFPFLPSHSKLRNLHLSHNSIRFYDHLTDNGTSLNSTTTV
EFYNLKNHMRNVTAQLWDDGLHGDISSLEILDLRGNQVEYFPVGFIQKMPTLSRLQMCTN
CLETLNLTSEQFSGSLYELDISNNRLNQIVSDKGTLTTLGNLTYFNLSLNFLERLPSRLF
SSLPSLRSVDLSYNHINICLSEEAEISTDSACVDWKNVVSLGQLYLKGCNIKIIPSAAFT
GLLLTHLELSDNPRLIIQQSIQTLSRTLQHLGLGNTHIQDFDFSLFTSLKFLNMSQNSLA
HLPPSLLNLDLEVLDLRDNRLSTIPSGLANALATKLHIVFLTGNPFNCCQTEWFRTFETT
KTINVVGLSDIECEDPLRETYRVQGLQPSVCSEESGESIFWYILLFVPLCFSFVGISIIA
VLTFKPKMLQKSIKKRCLKPTSY
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgccagtccacagcctcactcccatcctgctttgcttgttacccgtgtggataatcctg
acaccaggctcatgtcatccacagctcagcccatgccagctgatacaaagatcagcactg
tgcaacaatgcaaacctctcctctgtgccttcaggactcccacacaacacagaggagctt
cagctcaacttcaatcatattcagacactacaggatgactccttccttggttacccctca
ctgaaaaccctgagctttgcttgtaacagtctggagaaattagaatcaaacacttttcaa
aactcaaagttgttagaaagccttaatttagcaaataataaactttatattggctacgca
gaaaccagctatgcattaaaaaagctacctggtcttaaagctctagatctgtctgagaat
gaacttcatgacgaatttgtcaccatacttctccaaaatctgacgtccatagagtacctc
aatctctctggaaacctcctgcaaagacttgacgagacctcattcagtgacctacaccag
ctcaaagaactggacctgcagaggaacatcatgtttgagctcgatggcgccttcaacagc
aatcccaagctccagcggctcaacttggccttcaactatctgccttgcctaactgacttc
cacatgacccagctggtagtcctcaatgtcagccacaacttcattgagtggttcatctct
aatgacctcaatgaaactttccagctagagactctagatctgtcaaataacaaactgctt
ttctttcctttcttgcccagtcatagtaaattacgaaaccttcacttgtcccacaacagc
attaggttctatgaccacttgacagacaatggcacgtctctgaactcgactacaactgtt
gagttctacaatctgaagaatcacatgagaaatgtgactgctcagctgtgggacgatggt
cttcacggtgacatctcctctcttgagattttggatctaagaggaaatcaggtggagtat
tttcctgtaggattcatccagaaaatgcccaccctgtccagacttcaaatgtgcacaaac
tgtctggaaaccttaaatctaacttctgagcagttctctggcagcttgtatgagttggac
atcagcaacaacaggcttaaccagattgtgtcagataaaggtacgctgaccactcttggc
aatctgacatactttaaccttagcctgaattttcttgagaggttaccttcaagattgttt
tcctcactgccaagcctcaggtcagtggatctcagctataaccacattaatatttgtctt
tctgaagaagctgagatcagtacagactcagcttgtgtggactggaaaaacgttgtgtcc
cttgggcagctttacctcaaaggatgcaacatcaaaataattccatcggcagcgtttaca
gggttgttgctaacgcacttggaactgtccgataacccaaggctcattatccaacaatca
atacaaactctcagcagaactttacagcatctaggtttaggaaacactcacatacaagac
tttgacttctcccttttcacaagtttgaagtttttaaacatgtcacagaactctcttgcc
catcttcccccctctctcctaaatcttgacctggaagtgctcgacctcagggacaataga
ctgtccactatcccctcaggtctggctaacgcattagctacaaaacttcacattgttttc
ctcacaggaaatccattcaactgctgccagacagaatggttcaggacatttgaaacaaca
aaaacgatcaatgtggttggactgtcagacattgaatgtgaagatcccttaagagaaaca
tacagagtgcagggtttacagccatctgtgtgttcggaagaaagtggggaatctatattc
tggtacattctgctttttgtacccctgtgtttttcatttgtgggcatttccattattgct
gtcctcaccttcaagcccaaaatgctacaaaaatcaatcaaaaagaggtgtttgaagccc
acatcttactga
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