Lates calcarifer (barramundi perch): 108898414
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Entry
108898414 CDS
T04895
Name
(RefSeq) cell adhesion molecule 4 isoform X1
KO
K06783
cell adhesion molecule 4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108898414
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108898414
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
Nectin family
108898414
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
C2-set_2
V-set
C1-set
C2-set_3
Ig_4
Motif
Other DBs
NCBI-GeneID:
108898414
NCBI-ProteinID:
XP_018553819
UniProt:
A0AAJ7QE80
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Position
LG15:8501093..8637110
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AA seq
436 aa
AA seq
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MRPVQSSVLCRLLPAPFSLALRSLVLVLLCITPHCQAVQAENVTVLEGGTAQISCRLQNY
DGSIVVIQNPRRQTLFFNGTRALKDDRFQMVLFTPRLVRITLTNVSVLDEGGYFCQLYTD
ATHHQVATLSVLVPPETPTVEVKQEAVEGGEVELTCVSPRSKPAATLRWMRNGREIPGVV
SQQDNGKTFSVSSTIRIPVERKDNGAALSCEAFHPALSGQRRVRHYRLDVYFAPTVRIVP
PSGILREGDSLSLTCSVTGNPLPRNIQWSKINDTLPERAEISGPTLQISRLSQSHNGTYL
CQAQNNFGRAADHYTLLVYDNVSVTTTVPPTPTSTQLITSHSATPTLLTHSYAVDPEDPG
AVVETHSAVPYAVIGGVLALLVFTVICVLIVTIWCSVRQKGSYLTHEASGLDEHGEVQEA
FLNGNDASQGKKEYLL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctgtccagagctctgtcctctgtcgcctcctccctgcccccttctctctggcc
ctgcgcagcctggtcctggtcctgctctgcatcactcctcactgtcaggcggtgcaggcg
gagaatgtgacagtcttggagggagggacagcccagatctcctgccgcctgcagaactac
gatggatcaatcgtggtcatccagaatccccgccggcagaccctctttttcaacggcacg
cgagccctgaaggacgaccgtttccagatggtgctcttcacgccgcggctggtgcgcatc
acgttgaccaacgtcagcgtgttggacgagggcggctacttttgccagctctacacggac
gccacgcaccaccaggtggcgacgctctctgtcctggtgccgccggagacgcccacggtg
gaagtgaagcaggaggccgtggagggcggcgaggtggagctcacctgcgtgtcgccgcgc
agcaagccggccgccaccctgcgctggatgcgtaacggccgggagataccaggtgtggta
tcccagcaggacaatgggaagacgttcagtgtgtccagcaccatccggatcccggtagaa
aggaaagacaatggggcagcgctgagctgcgaggcgttccacccggcgctgagtggacag
aggagggttcggcactaccgcctggatgtgtattttgctcccacagtgagaattgttcct
ccttctggcattttgcgagagggcgactcgctgagcctcacctgctccgtcactggaaac
cctctgcccaggaacattcagtggtccaagattaatgacaccttacctgagagggcagag
atttccggccccaccctccagatttcccgtctcagccagtcacacaacgggacgtacttg
tgtcaggcccagaacaactttggacgcgctgctgatcattacaccctattggtgtatgat
aatgtgtcagtcactaccacggtccctcccactcccacctccacccaactaatcacctcc
cattccgccaccccaaccctcctaacacacagctacgccgtggacccggaagatcccggt
gcagtggtggagactcacagcgcagtaccatacgcggtgataggtggcgttctggcactg
ctggttttcaccgtcatctgcgtcctcatcgtcaccatctggtgctccgtccgacagaaa
ggttcctatcttacccatgaggccagtgggttggatgaacatggtgaggtgcaagaggcc
ttcctcaatgggaacgacgccagccagggcaagaaggagtacctactgtag
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