Lates calcarifer (barramundi perch): 108898465
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Entry
108898465 CDS
T04895
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108898465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108898465
03036 Chromosome and associated proteins [BR:
lcf03036
]
108898465
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108898465
Coactivators
SAGA/TFTC/STAGA complex
108898465
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108898465
STAGA complex
108898465
TFTC complex
108898465
SAGA complex
108898465
SLIK complex
108898465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
TFIID-31kDa
TAF4
CENP-T_C
TAF10
Tic110
Motif
Other DBs
NCBI-GeneID:
108898465
NCBI-ProteinID:
XP_018553847
UniProt:
A0AAJ7QEL4
LinkDB
All DBs
Position
LG15:complement(8484281..8487631)
Genome browser
AA seq
132 aa
AA seq
DB search
MANSTTTAVKALGAPGPAGRSSPEGSQVLSKKKLQDLVREIDPNEQLDEDVEEMLLQIAD
DFIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGYGSDEIRPFKKACTTEAHK
QRMALIRKTTKK
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atggctaacagcaccacaacagctgttaaggctttgggagctcctggccctgctggcaga
agtagtccagagggatctcaggtgctcagtaagaagaagctgcaggacctagtgagagag
attgacccaaatgagcagctggatgaggatgttgaggagatgctgctacaaattgcagat
gactttatagagagtgtagtgacagcagcctgtcaactggcgcgccatcgcaaatccaac
accttggaggtgaaggatgttcagttacatcttgaacgccagtggaacatgtggattcct
ggttatggctcagatgagatccggccgttcaagaaggcttgcaccacagaggctcacaaa
cagagaatggcactgatccgcaagacaaccaaaaaatag
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integrated database retrieval system
