KEGG   Lates calcarifer (barramundi perch): 108898490
Entry
108898490         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: multidrug resistance-associated protein 1-like
  KO
K05665  ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [EC:7.6.2.3]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf02010  ABC transporters
lcf04977  Vitamin digestion and absorption
lcf04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    108898490
 09150 Organismal Systems
  09154 Digestive system
   04977 Vitamin digestion and absorption
    108898490
   04981 Folate transport and metabolism
    108898490
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lcf02000]
    108898490
Enzymes [BR:lcf01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.3  ABC-type glutathione-S-conjugate transporter
     108898490
Transporters [BR:lcf02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    108898490
SSDB
Motif
Pfam: ABC_membrane ABC_tran TMD0_ABC SMC_N AAA_16 ABC_ATPase MMR_HSR1 AAA_29 RsgA_GTPase nSTAND1 AAA_25 AAA_22 Dynamin_N GTP_EFTU
Other DBs
NCBI-GeneID: 108898490
NCBI-ProteinID: XP_018553885
UniProt: A0AAJ7QEN5
LinkDB
Position
LG11:complement(22535121..22558558)
AA seq 1512 aa
MGLDRFCSSDSSDPFWDWNCTWYAENPDLTQCFQNTVLVWLPCLYLWLCAPIYLIYLRSH
DRGYICMSHLNKAKTAVGLLLWIICWLDVFYSFWERSHGSSVPAPVQLVSPTLLGLTMLL
ATLLIQYERMKGVQSSGIMLIFWLLALLCATVTFRSKILQALNQPLTVSVWRYTTFYIYY
ALLLVALFLSCLTDRPPLFSQAVKDLNPCPEPGASFLSRITFWWITRMMVTGYKRPLEEK
DLWSLNSEDRSQRVVPQLVRRWNTECQKVKRTEQKTLYSPRQVPCSESKEGRAVEESEIL
IVKTPQKTKEPSLFWALCLTFGPYFLISCLYKIIQDILMFVGPEILRLLIRFVNNSDAPP
WQGYFYTALLFICTCVQSLILQKYFHVCFVSGMRLRTAIIGAVYRKALVISSAARRTSTV
GEIVNLMSVDAQRFMDLITYINMIWSXPLQVVLALYFLWQNLGPSVLAGVAVMVLMVPIN
AVIAMKTKTYQVAQMKSKDSRIKLMNEMLNGIKVLKLYAWELAFKDKVSEIRESELRVLK
KAAYLGAMSTFTWVCAPFLVALSTFTVYVLIDERNILDAQKAFVSLALFNILRFPLNMLP
MVISSMVQASVSLKRLRVFLSHEELQEDSVDHKAAAGSPHSISIVDGVFSWSRAESPTLK
RLNVCIPEGSLVAVVGHVGSGKSSLLSALLGEMDKLEGTVAVKGSVAYVPQQAWIQNSTL
RDNIVFGQERRETWYQRVVEACALQPDLEILPAGDETEIGEKGVNLSGGQKQRVSLARAV
YCDRAVYLLDDPLSAVDAHVGKHIFEQVIGPQGLLKDKTRVLVTHGLSYLPQVDLILVMV
EGEVTEMGSYQQLMATEGAFAEFLRTYAAVDHTDNESVPKSVTKGLENGSATALVGTPDV
SRVSKLSQTGKEDKELNKKAKNPEVGKLTEADKASTGRVKLSVFWAYMKAIGVLLSCISV
LLFLTHHLVSLFSNYWLSLWTDDPVVNGTQPDDCMRLGVYGALGLSQGVAVFGYSLSMSI
GGILASRCLHQSMLYDVLRSPMSFFERTPSGNLVNRFAKEMDTIDSVIPSIIKMFIGSMF
NVLGACVIILIATPLVAIIIPVLGLLYFFVQRFYVASSRQLKRLESVSRSPIYTHFNETL
LGTSVIRAFGEQERFICESDRRVDHNQKAYYPSIVANRWLAVRLEFVGNCIVSFAALFAV
IARESLSPGIMGLSISYALQLTASLTWLVRMSSDVETNIVAVEKVKEYSDTEKEAEWKHE
PSSLPPGWPTEGRIDIRGFGLRYRHDLDLAIRNITININGGEKVGIVGRTGAGKSSLTLG
LFRIIEGAEGHIFIDGVDIAQLGLHELRSRITIIPQDPVLFSGSLRMNLDPFNSYSDEEV
WRALEFSHLKNFVSSLPDKLSHECSEGGENLSVGQRQLVCLARALLRKTKILVLDEATAA
VDMETDNLIQSTIRSQFEDCTVLTIAHRLNTIMDYTRVLVLDKGEMAEFDSPSNLIAQRG
AFYQMAKDAGLV
NT seq 4539 nt   +upstreamnt  +downstreamnt
atgggtttggacaggttctgcagttcggacagttccgacccgttctgggactggaactgt
acatggtacgctgaaaacccagacctgacccagtgtttccagaacactgtcctggtgtgg
ctgccatgcctctacctctggctgtgtgctcccatctacctcatctacctccgcagccat
gaccgtggctacatatgtatgagtcacctcaacaaagctaaaactgctgttggccttctg
ctgtggatcatctgctggttggatgttttctattctttctgggaaagaagtcatggcagc
agtgtccctgcacctgtccagctggtcagtccaaccttactgggcctcaccatgttgctg
gccaccctgttgatccagtatgaacggatgaaaggggttcagtcgtctggaataatgctg
atcttctggctgctggcgctgttgtgtgccacagtcaccttcaggtccaaaatcctccag
gccctgaaccagcctttgacggtgagcgtgtggcggtacaccaccttttatatctactat
gctctgctgctggtggctctgttcctgtcctgcctgacggaccgcccccccctcttctcc
caggctgttaaagacttgaacccctgtcctgagcctggagcgtctttcctctctaggata
accttctggtggatcaccagaatgatggtgacgggctacaagcgccccctggaggagaaa
gacctgtggtccctaaactctgaggaccgctcccagagagtggttccccagctggtgcga
cgctggaacacagagtgccagaaggtcaaaaggacagagcagaaaactttgtactctccc
aggcaggtcccatgcagtgagagcaaagagggccgagctgtggaggagtctgaaatcttg
attgtaaaaaccccccaaaaaacaaaggagccctccctgttctgggcgctgtgcctcacc
ttcgggccctacttcctcatctcctgcctctataagatcatccaggacatcctcatgttt
gttgggcccgagatcctgcggctgctgatccgctttgttaacaactctgacgcccccccc
tggcagggctacttctacactgctctgctcttcatatgtacctgtgtgcagtcactcatc
ctccagaagtactttcacgtctgcttcgtctcaggcatgcgcctgcgcaccgccatcatc
ggagctgtctacaggaaggccctggttataagcagtgcagcacgccgcacgtccacagtg
ggagagatcgttaacctgatgtctgtggatgcccagcgcttcatggacctcatcacctac
atcaacatgatatggtctngccccctgcaggtggtgcttgccctatactttctctggcag
aacctgggtccgtccgttctggctggagtggctgtgatggttctgatggttcctattaat
gctgtcatcgccatgaaaaccaaaacctaccaggtggctcagatgaagagtaaagacagt
cgcattaagctgatgaatgagatgctgaatggcatcaaggtgctgaagctgtatgcctgg
gagctggccttcaaggacaaagtgtcagaaatccgtgagagcgagctgcgggtcctaaag
aaggccgcctacctgggtgcgatgtccaccttcacctgggtctgtgcacctttcctggtt
gccctgtccactttcactgtgtacgtgctgatcgatgaacgcaacatcctcgatgcccag
aaggcatttgtgtcactggcgctattcaacatcctgcgttttcctctcaacatgctgcca
atggtcatcagcagtatggtgcaggccagtgtgtccttgaagcgactgagagtgtttcta
tcacatgaagaactgcaggaggacagtgtggatcacaaagcagcagcaggctccccacac
agtatctccattgtggatggagttttcagctggtccagagctgaatcaccgacactcaag
aggctgaatgtgtgtatcccagaaggctctctggtggctgtggtgggacacgtgggctca
ggaaagtcctcgctgctgtctgccctactcggagagatggacaaacttgagggaaccgtg
gctgtgaagggttcggtggcctacgttcctcagcaggcctggatccagaactccactctg
agagacaacatagtgtttggtcaggagaggagagagacatggtatcagcgtgtggtggag
gcatgtgctcttcagcctgacctcgagatccttcctgctggagacgagaccgagatcgga
gagaagggagtgaatctgtctggaggtcagaagcagagggtgagcctggccagggctgtc
tactgtgaccgagctgtgtacctgctggacgaccccctgtctgccgttgacgctcacgta
ggaaaacacatcttcgaacaagtcattggcccacagggactgcttaaggacaagactcgc
gtgctggtgacccatgggttgagctacctgccccaggtggacctgatcctggtgatggtg
gagggagaggtcacagagatgggctcctaccagcagctcatggccacagagggagccttc
gctgagttcctgcgaacatacgctgctgtcgaccacacggacaatgagtctgtgccaaag
agtgtgaccaaaggactggagaacggcagcgcgactgctcttgttggcactccagatgtc
agcagagtgtctaagttgtcccagacgggcaaggaggacaaggaactgaacaagaaggcc
aagaaccctgaggtgggaaagctgacagaggcagacaaggccagcactggacgggtgaag
ctgtctgtgttctgggcctatatgaaagctatcggggtgcttctatcctgcatcagtgtg
ctgctgttcctcacccatcacctggtctccctcttctctaactactggctgagcctgtgg
accgacgaccccgtggtcaacggcactcagcctgacgactgcatgagactgggggtgtac
ggtgctctcggcctgtcccagggtgtggcagtctttggttactccctctccatgtccatt
gggggcatcctggcatcacgctgcctccaccagtccatgctgtatgacgtcctgcgctca
cctatgtccttctttgagcgaacgcccagtggaaacctggtcaaccgctttgctaaggag
atggacactattgactcagtgatccccagcattattaaaatgttcatcggctccatgttc
aatgttttgggggcttgtgtcatcatacttattgccacaccgctggtagctattattatt
cctgttctcgggttgctctacttttttgtgcagaggttttacgtggcatcatctcgtcag
ctgaagcgtctggaatcagtcagccgttcacccatctacacccacttcaatgaaacactg
ctgggcacctctgtcatccgcgcctttggtgaacaggagcgcttcatctgtgagagtgac
aggcgagtggaccacaaccagaaggcttactaccccagcatagtagccaacaggtggttg
gcagtccgtctggagtttgtgggaaactgcatcgtgtcatttgctgctttgtttgctgtc
atagctcgagagagcctcagtccaggcatcatgggcctgtctatatcttacgccctgcag
ctgactgcctctctgacctggctggtgaggatgtcatctgatgtggagaccaacatagtg
gctgtggagaaagtgaaagagtacagtgacacagagaaagaggcagagtggaaacacgag
ccctccagccttcccccgggttggcccactgagggccgcatcgacatcagaggctttggc
ctgcgctaccgccacgacctggacctggccattcgcaacatcaccatcaacattaacgga
ggagagaaggtggggatcgtggggcgcactggagcagggaagtcctccctgacgctgggt
ctgttccggatcatcgagggagccgagggccatatcttcattgacggggtggacattgct
cagctgggcctccatgagctccgctccaggatcaccatcatcccacaggacccagtgcta
ttttcaggctctctgaggatgaacctggatcctttcaacagctactctgatgaggaagtg
tggcgggctctggagttctcccatctcaagaactttgtgtccagcctgcctgacaagctc
agccatgagtgcagtgaaggaggagagaacctcagtgtgggtcagaggcagctggtgtgc
ctggccagagctctgctgaggaagaccaagatcctggtcctggatgaggccactgcagct
gtggacatggagacagacaacctgatccagtccaccatccgctctcagtttgaggactgc
accgtcctgacaatagctcatcgccttaacaccatcatggactacaccagggtcctggtg
ttggataaaggagagatggcagagtttgactccccctctaatctcatcgctcagagagga
gccttttatcagatggccaaggacgctgggctggtctga

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