Lates calcarifer (barramundi perch): 108898505
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Entry
108898505 CDS
T04895
Name
(RefSeq) F-box/LRR-repeat protein 16
KO
K10282
F-box and leucine-rich repeat protein 16
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108898505
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
108898505
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GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_8
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
108898505
NCBI-ProteinID:
XP_018553908
UniProt:
A0A4W6DXV7
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Position
LG11:22868690..22897871
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AA seq
504 aa
AA seq
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MLNMSTPSELKSPCVTRNGMVKLPPSQPNGLGSASITKGTPAAKNRLCQSSSVPSILPPP
PSSLPYHHHHHLDGPGMPHSAASLMTSDLETGKPLVGLKPTLRQLPPLTLPKPMLLERQL
VLDEKLLNRLLWYFTTGEKCVLAQVCKTWRKVLYQPKFWEGVTPILHAKELYTLLPNGEK
EFVSLQAFALRGFQSFCLVGVSDLDICEFIDNYPLSKKGVRSVSLKRSTITDAGLEVMLE
QMQGLMHLELSGCNDFTEAGLWSSLNARLTSLSVSDCINVADDAIAAISQLLPNLSELSL
QAYHVTDTAMAYFTAKQGYTTHTLRLHSCWEITNHGVVNMVHSLPNLTALSLSGCSKITD
DGVELVAENLRKLRSLDLSWCPRITDMALEYIACDLHKLEELVLDRCVRITDTGLGYLST
MSSLRSLYLRWCCQVQDFGLQHLFGMRSLRLLSLAGCPLLTTTGLSGLIQLQELEELELT
NCPGATAELFKYYSQHLPHCMVIE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacatgtccacccccagcgagctgaagtctccctgtgtgactcgcaacggtatg
gtgaagttgccccccagccagcccaatggtctgggcagtgcgagtatcaccaaggggaca
cctgctgccaagaaccgcctgtgccagtcctcctcggttccctccatcttaccccctcca
ccctcctccctgccctaccaccaccaccaccacctggacggccctggcatgccccactca
gcagcctctctcatgacttccgacctagagactggaaagcctctggtgggcttgaagccg
acccttcgccagcttccccctctcactctacccaaacccatgctgctggagcgccaactc
gtcctggatgagaagctgctcaaccgactgctctggtacttcaccacaggtgaaaaatgt
gtgctggcacaggtatgcaagacatggcgcaaggtgctctaccagcccaagttctgggag
ggtgtaacacccatcttgcatgccaaggagctatataccttgctgcccaatggggagaag
gagtttgtcagtctacaagcctttgccctgcgtggcttccagtctttctgcctagtgggc
gtgtcagacctggacatttgtgagttcatcgacaactacccactgtccaagaagggtgtc
cgctcagtcagcctcaagaggtccaccatcacagatgctggtttggaggtcatgttggag
cagatgcaaggcctgatgcatcttgaactgtcaggctgtaacgacttcacagaggctggc
ctgtggtccagtctgaatgcccggctaacttccctcagtgtcagtgactgcatcaatgtg
gcggatgatgccatcgctgctatctcacagctcctgcccaacctatcagagttgagcctg
caggcctaccacgtcactgacacggccatggcctacttcacagccaaacagggctacacc
acccacactctgcgacttcactcctgctgggagatcaccaatcatggtgtggtcaacatg
gtgcacagccttcccaaccttactgccctgagcctctccggctgctccaagatcactgac
gatggtgtggagttggtcgctgagaacctgcgtaagctccgcagcctggacttatcctgg
tgccctcggatcactgacatggccctggaatacatcgcctgtgacctgcataaattggag
gaactggtgctggacaggtgtgtgcggatcacagacactggtttaggctacttgtccacc
atgtcatcattaaggagcctctatttgcgctggtgctgtcaggtacaagattttggactg
cagcatttgtttggaatgagaagtcttcgtctactgtcccttgcaggctgccccctgctg
actaccactggtctgtcaggcctcatccagctgcaggaactggaggagctggagctaacc
aactgccctggagccaccgccgaactcttcaaatactactcccagcacctgccccactgc
atggtcatcgagtaa
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