Lates calcarifer (barramundi perch): 108898630
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Entry
108898630 CDS
T04895
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a
KO
K10839
UV excision repair protein RAD23
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03420
Nucleotide excision repair
lcf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108898630 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
108898630 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lcf03051
]
108898630 (rad23aa)
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108898630 (rad23aa)
Proteasome [BR:
lcf03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
108898630 (rad23aa)
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
108898630 (rad23aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
Ubiquitin_2
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
108898630
NCBI-ProteinID:
XP_018554083
UniProt:
A0A4W6E975
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All DBs
Position
LG11:complement(18902120..18913146)
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AA seq
369 aa
AA seq
DB search
MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKPAAAASPPVSEAPKPPAQDSGSTSTAASATTPASAPAPAPVP
APAAVPIPPEEAKEEPSAAATEPQQPASSSGGSQGLDASSALVTGAEYEAMLTEIMSMGY
ERERVVAALRASFNNPHRAVEYLLTGIPSSPVQESNPPAQAPASGPTEAPSLAEGDNPLA
FLRTQPQFLHMRQAIQQNPALLPALLQQLGRENPQLLQQISQHQELFIQMLNEPVGEGGD
APEVGEMGAAGEEGAPVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANF
LLNQGLEDD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacgcttaaaacactgcagcagcagactattcaaattgagatagaccccgaa
caaacggtgaaagctttgaaagagaagatagaagcagaaagaggcaaagacaactttcct
gtttctgggcagaagctcatatatgctggaaaaatcctgcaagatgacacacctattaag
gactacaaaattgatgagaagaattttgttgtagtgatggtgtccaaggccaagcctgca
gctgccgcctcgcccccagtttcagaagcacccaagccccctgcacaggactctggctcc
acatcaacagctgcctcagccacaaccccagcctcagcccctgccccagccccagtccct
gccccagcagctgtccccattccccccgaggaggccaaagaggagccaagtgccgcagcc
acagaaccacaacagccagccagctccagtggcgggagccagggtttggatgcctcctca
gcacttgtgactggggccgagtatgaggcgatgctgacagagatcatgtctatgggctac
gaaagggagagagtggtggctgcactaagggccagtttcaacaacccccacagagctgta
gagtaccttctcactggcatacccagtagcccagtccaggagagtaatccaccagcacag
gcccctgcatctggacccacagaagccccatctctagcagagggagataacccacttgca
ttcttgcggacccagccccagtttcttcacatgagacaggccatccagcagaaccctgct
ctgcttccagctcttctccagcagctaggcagagagaaccctcaacttctacagcaaatc
agtcagcatcaggagctattcatccagatgttgaatgagccagtgggagaggggggagat
gcgccagaggttggagagatgggggcagcaggggaggagggcgcacctgttaactatatc
caggttacacctcaggagaaggaagccatcgaaaggttaaaagcgttgggttttcctgag
gctctggtgatccaggcctactttgcctgcgagaagaacgagaacctggcagccaacttt
ctcctcaaccagggactggaggatgactga
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integrated database retrieval system
