Lates calcarifer (barramundi perch): 108898654
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Entry
108898654 CDS
T04895
Name
(RefSeq) caskin-1 isoform X3
KO
K21952
CASK-interacting protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108898654
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
108898654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Caskin1-CID
Ank_4
Ank_5
Caskin-Pro-rich
SAM_2
Ank_3
Caskin-tail
SH3_2
SH3_1
SH3_9
SAM_TNK
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
108898654
NCBI-ProteinID:
XP_018554131
UniProt:
A0AAJ7VHK2
LinkDB
All DBs
Position
LG11:complement(18978719..19081247)
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AA seq
1642 aa
AA seq
DB search
MGKDQELLQAVKTEDLLTVQKLLQRPRPGKAKLLGSAKKVNVNFQDTDGFSPLHHAALNG
NLELISLLLESQAAVDIRDQKGMRPLHYAAWQGKAEPMKMLLKSGSSVNGQSDEGQIPLH
LSAQHGHYDVSEMLLQHQSNPCIVDNAGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPK
KGDTTDPNGTSPLHLAAKNGHIDIIRLLIQAGIDINRQTKAGTALHEAALCGKTEAVRLL
LDSGINATVRNTYSQTALDIVYQFTATQASREIKQLLRDASAALQVRALKDYCNNYDLTS
LNIKAGDVITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSTMVEVISKRTGLASTVICTQQ
FQKIPLVPPATVAPANAVVNGNDTTFHQIHILPPPPPPPPHSHQPLLPLFTSFGYNRSPV
TTPQGDTPTAPGCRGSEASPHSSPTPSSGPHGGSNEEIWVLRKPVAGGDRSSVGSSGSVT
SVRSSGSGQSAGSAAHILHAQAEGVKLLATVLSQSAKAKEHLLEQSKSVDQPAAGSASSS
RTSSQSGCPLHEAPPYDATATRKGEVPGEGKSSEAVVQWLSDFQLQVYAPNFLGAGYDLP
TISRMTPEDLTAIGITKPGHRKKMTSEINKLNVSEWLPDQKPANLGEWLSAIGLSQYHQV
LVQNGYENIDFITDITWEDLQEIGITKLGHQKKLMLAVKRLAEMQRGSDGRGSLRKKPPP
ITQQQEVMSVDSPPPDEVMSPKMSTFQDSELSTELQSAMTQPGQEVKAQRTRSLSKDHDE
VMTGGGGGGTGPPKKEARTMRQQSSQGSTSSHRGSVSSQGKHRHSHSHSQPAPPYTPPHT
PTKTRTSSSSSTSSAQSAPSPQAKPKPSPQFIQGERPQSPRSHPPQSPTHRGAPCIQPQP
QPQPQPQQQPQPQQQQQQPLVQPQNQAHSQHHSQTQMMEVRESQQPQVPLLCLPPEVELA
EGEGAEPSALQKKRAHSLNRYAVSDGECDEKAGGGGGGGEGEAEVVGNQSSAVVRGEGGK
YATVTHRVSRSHSVRNQEKNANRNQTQSFALRQKKKGPPPPPPKRSSSAISSSNSNLTDA
NTLQQTHTTTGGMLDVPYHQQRRASDLGVSVETAAVETSSMGSVRSIAAMLEMSSIGGGA
KGMALQKNFLQVGKTRDAIGLDGEVVNRRRTISGPVTELVAAARRNQPTPSALPSPSVQP
ETSPPTVNSSSPHPPSSPHPSSGGSSSSSENLPFAEEGSLTIRRQGRGEGEGQGDGEGPQ
GDGGYPQEDISNVEATATLKRRPRSSKPHPNGSDFTLQESSTVKRRPKSRDKEPEGYADM
ATANGEPVATGPPNTTQPVPYQNGTATMKRRPVSDAGVTEQPQPLPQQQPQPQVTAAPRR
DSVDQGAPVVNEGGPQRKPKPPVSPKPVVGQIKRQGGPQTPPQPSSNKRVPLPGPGTPGS
PVEGKKIPPPVSPKPVPPPTAPKPAKLIHSMTSPPSPTPAPAPVKQHSAVARQTSSPPSF
PPSNTPSPPNAKPPSPSAQSPHTPQTPTTPQTPQTPATPSPTPPPVKPPRSSIGGVSVDS
GMVGGGVTAPPATTTPDFSVDSLVHQKLEETSASLAAALRAVEDKILRQEDSVAEQKTTV
SILDDIGSMFDDLADQLDAMLE
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaccaggaactgctgcaggcggtgaagaccgaggacctgctcaccgtgcag
aagctgctgcaaaggccccggccagggaaagcaaagctcctcggttctgcaaagaaagtg
aatgtcaacttccaggacacagatgggttttctccgctgcatcatgcggctctcaatggc
aacctggagctcatctctctgctgctggagtcacaggctgctgttgacatcagagaccag
aaaggtatgcggccgctgcactatgccgcctggcaggggaaggcagagcctatgaagatg
ttgctgaaatctggttcgtctgtcaacggccagtcagatgaaggacaaattcctctccac
ctgtcagcacagcacggccattacgatgtgtctgagatgttgctgcagcaccagtcaaac
ccatgtatcgtggataacgcagggaaaacacctctggacctggcctgtgagtttggcaga
gttggggtggtccagttgttactgtccagtaacatgtgcgctgctttattggagcccaaa
aaaggagacaccactgaccccaatgggacgtctcctctccacctggctgccaagaatgga
cacatagacatcatcagactgttgattcaggctggtatcgacatcaacagacagaccaaa
gcgggcactgccctgcatgaagctgctctctgcggcaagaccgaggcagtgagactcctg
ctggacagtggtatcaatgccacagtgaggaacacttacagccagactgcgctggatatc
gtctaccagttcactgcaacacaagccagcagagagatcaaacaactgctaagagatgca
tcagcagcccttcaggttcgggctctgaaagattactgcaacaattacgacctgaccagc
ctcaacatcaaagcaggagatgttattacggttttggagcagcaccctgacggacgctgg
aaaggctgtatccatgacaaccgaacaggaaatgaccgggtgggctacttcccgtccacc
atggtagaagtcatcagcaagcgcacaggtttggccagcacagtcatttgcactcaacag
tttcaaaagataccgctggttcccccggcgacggttgcccctgccaacgcggtagtcaac
ggcaacgacaccacgttccatcagatccatatcctgcctccaccgcctcctcctccacca
cattcccatcagccactgcttccacttttcacttcctttggctataacaggtcgcccgtg
acaaccccacagggagacacacccactgccccaggttgtcgcggctcagaggcaagtcct
cacagctcccccaccccatccagcgggccccatggaggctccaacgaagagatctgggta
ctgcgcaagcccgtggcaggtggagaccgcagcagtgtgggtagttctggcagtgtcacc
agtgtgaggtcgtcaggcagcggtcagagtgccggcagtgccgcacacatcctccatgca
caggctgagggggttaagcttctagccacggtcctgtcccagtctgccaaagctaaggag
catctgctggagcagtccaagtcggtagaccaacctgcagcaggctctgccagctcctca
cggacatcgagccaatcgggctgtccgctccatgaagcgccgccttatgacgccacggca
accaggaagggggaggtgccaggcgaggggaagagctcagaggccgttgtccaatggctg
agtgactttcagctgcaggtctacgctccaaacttcctgggcgctgggtatgacttgccc
accattagccgaatgaccccagaggatctgacagctattgggataactaaaccaggtcac
agaaagaaaatgacatcagagattaacaagctaaatgtctcagagtggctacctgatcag
aaacctgccaatctaggagaatggttatctgccattggtctaagccagtaccaccaggtg
ttagtgcagaacggttatgagaacatcgactttatcactgacatcacttgggaggacctg
caagaaatcggcatcaccaaactgggtcaccaaaagaagctgatgctggcagtgaagcga
ctggcagaaatgcagcgtggttcagatgggcggggctccctccgaaagaagcccccacca
atcacacagcagcaggaagtcatgtcagtggacagcccacctccagacgaggtcatgtct
ccaaagatgagcaccttccaggacagcgagttgagcactgagctacagagtgccatgact
caaccaggtcaggaggtcaaagctcaacgaacacgcagcctgagcaaagatcatgatgag
gtgatgacaggaggtgggggaggaggtactgggccacctaagaaggaggcgcggactatg
aggcagcagagcagccagggaagcacctcctcccacagaggcagtgtctcctctcaaggc
aaacaccgtcactcccactcccattcacagcctgctccaccctacacgccccctcacact
cctaccaagactagaacctcgtcttcctcctccacttcctctgcccagagcgcaccttcc
ccgcaggccaaacccaagccgtccccccagttcatccagggggagagacctcagtcaccg
cgctcacacccacctcagtctccaacccaccgcggggctccatgtatccagcctcaacct
cagcctcagcctcagcctcagcagcagcctcagcctcagcagcagcagcagcagcctcta
gtccagccacagaaccaggcacacagtcagcaccactcacagacacagatgatggaggtc
agggagagccaacaaccacaggtccctctcctctgcctccccccagaggttgaacttgct
gagggagaaggagcagagccctcggcgctccagaagaaacgcgctcacagcctcaaccga
tatgccgtgtccgatggcgaatgtgatgaaaaagcaggaggaggaggtggaggcggagaa
ggagaagcagaggtagtaggaaatcagagctcagctgtcgtcagaggggagggaggtaaa
tacgccacagtgacccaccgcgtcagccgcagccactccgtccgcaaccaggaaaagaac
gctaaccgcaaccaaacgcagtcctttgcgctgcgtcagaagaaaaaaggcccgcccccg
ccaccgcccaaacgttccagctctgccatctccagttccaactccaacctgacagatgcc
aacacactgcagcaaacacatactaccacaggggggatgctggacgtgccttaccaccaa
cagcggcgggccagcgacctcggggtgtccgtggaaacagctgctgtggagacgagcagc
atgggtagcgtcaggagcatcgctgccatgttggaaatgtcttctatagggggtggagcc
aaaggcatggcactgcagaagaatttcttgcaggtggggaaaacacgggatgccattggt
ctggacggtgaagtggtgaaccgacggcggaccattagtggccctgtcacagagctggtg
gcagctgccaggcggaaccagccaactccctctgctctcccatctccctccgtccaacct
gaaacctcccctcccactgtaaattcctcctccccccaccctccgtcgtccccccacccc
agctcgggaggcagcagcagctcatcagagaacctgccatttgcggaggaggggagcttg
acaatccgccgccagggtcgaggagaaggagaaggacagggtgacggcgagggtccccag
ggagatggtggttacccccaggaagacatctccaatgttgaggccacagcaaccttgaag
cgacggccccgcagctccaagccccaccccaatggctccgacttcaccctccaggaatca
tccactgtcaaacggcggcccaagagccgcgacaaggagcctgagggctatgcagacatg
gccacagctaatggagagcctgtggcaactgggccaccaaacaccacgcaaccagtaccc
tatcagaatggcactgccaccatgaaacgccgcccggtgtctgatgcaggagtgacggag
cagccacaacctctaccccaacaacaacctcagccgcaagtgactgctgctcctcgcagg
gacagtgtggatcaaggagctccagtggtcaatgaaggaggtccacaaaggaaaccaaag
ccgccagtctcccctaagcctgtggtggggcagataaagagacaaggaggcccacagacc
cccccacagccttcctccaacaaaagagtcccgttgccaggtcctggaacaccaggaagc
ccagtggaaggaaagaagatacctccaccagtctcacccaaaccagtgccaccgcccaca
gcacccaaaccggccaagctcatccactccatgaccagtcccccttccccaaccccggcc
cctgccccggtaaaacagcactctgcggtggcccgacagaccagctcaccgccctctttc
cccccttccaacactcccagcccgccaaatgccaagccaccgagcccgtctgcccagagc
ccccacaccccgcagacacccaccacaccacagacgccccagactcccgccactcccagc
ccgaccccaccgcccgtcaagccacctcgatcctccatcgggggtgtgtcggtggacagc
gggatggttggaggtggggtgacggctccacctgctacaacaacaccagacttcagtgtg
gattctttggtgcatcagaaactcgaggagacaagtgcatcgctggccgcggctctgcgg
gctgtggaggataagatactgcggcaggaggactctgtggctgagcagaagaccacggtt
agcatcctggatgacatcggcagcatgttcgatgacctggccgaccagctggacgccatg
ttggagtaa
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