Lates calcarifer (barramundi perch): 108898715
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Entry
108898715 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: dynamin-binding protein-like
KO
K20705
dynamin-binding protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108898715
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108898715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_2
SH3_1
BAR
RhoGEF
Motif
Other DBs
NCBI-GeneID:
108898715
NCBI-ProteinID:
XP_018554230
UniProt:
A0AAJ7VHM8
LinkDB
All DBs
Position
LG23:complement(10381930..10426045)
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AA seq
1714 aa
AA seq
DB search
MEAGSVVRAVFEFLPSVSEELPLFTGDVIEVLSVVDEFWLLGNKDGVTGQFPSTFVEEIT
IPSTKPGDRLYVCVSDFSSAEPGNLSLKRGDVVVGEAGGSMNLGETWQRGCNAWGIRGLF
PTSCVKELNLSGRSRQLSERSAQAQASELPPYALGQARALMNLHAQLNEELDFREGDLII
ITGLPEPGWFQGELEGRRGIFPEGFVELLGPLRSPQEPTDCQYLNTDLQQFSYEDNYDAG
EGTEEEGVEEGEVFLREEEEQKEDEVHEEEEEEGGVYGVALYEFRAMEPGELDFDVGDRI
RLISTLEDGWLEGELRGQRGIFPHRFVKIEGDGQKTSEETSVAEPEEDKGNSCTSDYNGS
ENDPEWRTYEDHTVWDLDYFERTEEQRFQNENKGTGTQTNNRTQREGGNRPDSQPHRPVA
PSQRRPERPKSTPPARPRLPPRPSLPARSHRHHSPSSGAHRSKYTNGNTRPLQPRLTHSL
TLPSTQHGWSKDSRYYQRPPADGATTNSRSASLGQALINLVEGHKQKKLTRHASISDADM
MMGSAETRTHSQQTTRGSNGIMPTSITLDALATSASDLEAKLTQQLFEFEKSLTTSYSDT
NVSSGASRDMSSVSDLSQQSHISRHFSILDYSDESDIIRGSSHSPVSHLLQSNSASSSLE
RRRTLRPPPPRPRALRPPAPAPYKPARPAPRPPPRCPRQNTAPPTSNPPTSNPIFYTPDE
PAVNLLDQIAEGQGEFGDLAAAQEHEIRCQLEAEKELEREMELESQRQREEEERYQLLLR
LQEVEHDMEAYAHTAEELRAMLEEEEEETARMQAMENLEFCNYTLETLALEQQQLQEMTL
LSSQPKPLDSAPASDSTPATSTDTEDPELRMLEKRSKVIEELLQTEKDYIKDLQMCVKEI
IEPLRKKQVKNVDFDGLFGNINSVIDLSQRLFDTLHETDSIGKVFLDFKTELEEVYKIYC
QNHDDAISLLESYEKDENIQRHVLECLDRLRAIYRDWGKTNYINLGSFLIKPVQRVMRYP
LLLMELLGATPESHHDRPQLTEALQAVKEINVNINEYKRRKDLVVKYRKGDEDTFIDKIS
KLSMHSIIKKSNRVSSHLKHLTGISPQIKDEAFDEAEKKFRLQERLIKSFIRNISLYLQH
IRESASVKVLAAISFCDIYTERSMLDPERFQRAHRCISDKQFTQFKERTETLVINPLTQL
LLMFAGPHKLIQKRFDKLLDYDNCKERADRLKDRRVQEELQVARNNYEALNAQLLDELPK
FHSAAEELFTGCVTAFAQAQKDFMKTTLGELKPLLQVFSSKVSTEGNLIAQFQEEYGRVL
QLLQSFSFCPENLPPATTTKKPFERKTLEKQTSKKQLQGPPNCVVQTEEHRAGLLVRYGP
EKLFQAERNFNAAQDLDVSIQEGDLVGVIKQQDPMGSHNRWLIDNGVTKGFVYSSFLKPY
NPRRSQSDVSIESQSSNESGYGGSSPVFSRQNSNSTLTFNQETATVSFSTSQAQNHSSPH
PSLDSASSRRSHHRDVPNPDSASQSNSINSSPRNPSNRREYSDQTHRNSPRHRDAEPSYQ
HSGNHRDSYDTSYASSSSHRETSDLSETDSSSSHRNNHSQRYGHTDKSYSSYQWRNGENC
GQKKSAYPRDEYIEPEPEPEPEPEPESELDGHQIYYALYSFNARCPNELSISANQRLRIL
EFQDMNGNSEWWLGEAGGRRGYVPSNYIRKSEYT
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagggtcggtggtgcgtgccgtgtttgagtttctccccagcgtctctgaggag
ctgccactcttcaccggtgatgtcattgaggtgctcagtgttgtggacgagttctggttg
cttggtaacaaagatggtgtcacaggtcaattccccagcacgtttgtggaagagattacc
attcccagcaccaagcctggagaccgactctacgtatgcgtcagtgatttcagctcagcg
gagccgggcaacctgtctctgaagagaggtgatgtggtagtcggagaggcaggggggtcc
atgaacctcggggaaacatggcaacgtggctgtaatgcctggggcatccgtggccttttc
cccacatcatgtgtgaaggagctgaacctttcaggtcgctccaggcagctgtctgaacgc
tcagcccaggctcaagcttcagagctcccaccttatgccctaggccaggcccgggccctt
atgaacctccatgcgcagcttaacgaggagctggacttccgtgagggggacctgatcatc
atcacaggcctgcctgagccgggctggttccagggagagctggagggccgcaggggaatc
ttcccagagggctttgtggagctcttaggtccccttcgctctcctcaggagcccacagac
tgccagtatctgaacactgaccttcagcagttcagctatgaggacaattacgatgcagga
gagggcactgaggaggagggtgtggaagaaggggaggtttttctgagagaggaagaggag
cagaaggaggatgaagtacatgaagaagaggaggaggagggcggtgtctatggagtggca
ctgtacgagtttcgggccatggagcccggtgagttggactttgatgtgggagatcgtata
cgtcttataagcactttggaagatggttggctggagggggagctgagagggcagcgtggt
atttttcctcatcgttttgtcaagatagagggcgacgggcagaaaacctcagaggaaaca
agtgttgctgagccagaagaagacaaggggaacagctgcacctctgattacaatgggtca
gagaatgatcctgagtggaggacgtacgaggatcatacagtgtgggacctggattacttc
gagaggactgaggagcagaggtttcaaaatgaaaacaaaggcactgggactcaaactaac
aacagaacacagagagaaggaggcaacaggcctgactctcaaccacatagacctgtcgcc
ccgtcacaaagacggcccgagagacccaaatcaactcctccagcaagacccagactcccg
cctcggcctagcctgcctgcacgtagccacaggcaccatagcccatcttctggtgcacat
cggtctaagtatacgaatggtaacactcgaccattacagcccaggctaactcacagccta
accctccccagcactcagcatggttggtctaaagacagcagatactaccagaggccacca
gcggacggtgccaccactaacagcagaagtgccagtctcggccaggcattgattaacctc
gttgaaggccacaaacagaagaagctaactcgccatgctagcatcagtgatgctgatatg
atgatgggcagcgctgagacacggacacattcccagcagacaacgcgtggctccaacggg
ataatgccaacatccatcaccttagatgccctggcaacctcggccagtgacttggaggcc
aagctaacccagcagctttttgagtttgagaaaagcttgaccacctcatatagcgataca
aacgtgagctctggtgcctcaagggacatgtcatctgtaagtgacctgagtcagcagtcc
catatctcacgacacttttctattctggactacagtgatgaaagtgatataatccgaggc
tcctcgcattctcctgtgtcccacctcttgcagtcaaactctgcttcctcctcgctggag
aggcgcaggaccctccgtcctccccctcctcgtcccagagcccttcgtcccccagctcca
gctccatacaaaccggcccgcccggctccacgcccccctccgcgctgcccgagacaaaac
accgctcctccaaccagcaaccccccaacgagcaaccccatcttctacacccctgacgaa
ccagctgtcaaccttctcgaccaaatagcggaaggccagggcgagttcggcgacctcgcg
gccgcccaggagcacgagatccggtgccagctggaggcagagaaagagctggagagggag
atggagctggagagtcagagacagagggaagaggaggagaggtaccagctgttgctacgg
ttacaagaggtggagcacgacatggaggcatacgcgcacacagcagaggaactcagggcc
atgctggaggaggaggaagaggagacggcccgcatgcaagccatggagaatctggagttc
tgcaactacacgctggagacgctagccctggagcagcaacagctacaagagatgacgctc
ctgtcgtcccaacccaaaccacttgactctgccccggcctcggactcgacccccgccacc
agcacggacaccgaggacccggagctgaggatgctggagaagaggtcaaaggtcattgag
gagctgctgcagacggagaaggactacatcaaagacctgcagatgtgtgtcaaggaaatc
attgagccgctgcggaagaaacaggtaaagaacgtggactttgacgggctctttggaaac
atcaactctgtgattgacttgtcgcagcggctgtttgacacactgcatgagacagactct
attggaaaggtatttctggacttcaagaccgagctggaggaggtgtacaagatctactgc
cagaaccatgacgatgccatctctctgctggagagctacgagaaagacgaaaacatccag
cgccacgtgttggagtgtctcgacagactgagagccatttatcgagactggggtaaaacg
aattacatcaacctcggctctttcctgatcaagccggtgcagcgggtgatgcgttacccg
ctgctgctgatggagctgctgggggccacgcccgagagccaccacgaccggccccagctg
actgaggctctgcaggctgtcaaggagatcaacgtaaacatcaacgaatacaagcgcagg
aaggacctcgtggtgaagtacaggaaaggggacgaggacacgttcatcgacaagatctcc
aagctgagcatgcactccattatcaaaaaatccaaccgggtcagcagccacctcaagcac
ctcacaggaatttcaccccagattaaagatgaagcgtttgatgaggctgagaagaaattc
agactgcaggagagactcatcaaatcttttatcaggaacatttccttgtacctgcaacat
atcagggaatccgcatccgtgaaggtcttggcagccatcagtttctgtgacatctacaca
gagcgcagtatgctagaccctgagcgcttccagagagctcaccgctgcatcagtgacaag
cagttcacacaatttaaggagcgcacagagaccttagtcatcaacccactcacccagctg
ctcctcatgttcgccgggccgcacaaactcatccaaaagcgtttcgacaagctgctggac
tacgacaactgcaaggagcgagctgaccgcctcaaggaccgccgtgtccaggaggagctg
caggtggcgcgcaacaactacgaggcgctgaacgcccagcttctcgacgagctccccaag
ttccacagtgcagcggaggagctgtttacgggttgcgtgacagccttcgctcaagcgcag
aaggatttcatgaagacaacgctgggagagctgaagcccctcctacaggttttttccagc
aaagtcagcacggagggcaacctcatcgcacagttccaagaagagtacggccgagttctc
caacttctacagagctttagcttctgcccggagaacctgcctccagccaccaccacaaaa
aagccctttgagaggaagactctggaaaagcagacgtctaaaaagcaactgcagggacct
ccaaactgcgtcgtgcagacagaggagcaccgtgcaggacttctggtacgctacggccct
gagaaacttttccaggctgagaggaactttaatgctgcccaggatctggatgtgtctata
caagagggagaccttgtgggtgtgatcaagcagcaggaccctatgggtagccacaaccgc
tggctaattgataatggagtcactaagggttttgtctacagctccttcctcaaaccttac
aacccgcgcagaagccagtcggacgtgtccatcgagagccagtcatccaatgagtcaggc
tatggcggttcctcccctgttttctcccgccagaacagcaacagcacgctgacctttaat
caggaaacagccaccgtcagcttttccacatcgcaggcccagaatcattcgtcgccacac
ccgtcgctggactctgcatcgtctcgtaggagtcaccacagagatgtgcccaaccccgac
tctgccagtcaaagcaactccataaactcctcgccccgaaatccctcgaaccgaagggaa
tattcagaccaaacgcaccgaaactcccccagacacagagatgcagagccttcgtaccag
cactcaggcaatcacagagactcgtatgatacaagttacgcaagttcgagcagccacaga
gaaacgtcggacctctcagagacagactcttcttcttcacacagaaacaatcactcacaa
cggtatggacacacagacaaatcctatagttcataccagtggagaaatggagagaattgt
ggccaaaagaagtctgcttaccccagagatgagtacatcgagccggagccagagcctgag
ccagaaccagaacctgagagtgaattagacggtcatcagatttattatgctctctactct
ttcaatgcccgttgtcccaacgaactgagcatctcagccaatcagcggctgcggatactg
gagttccaggacatgaacggcaacagcgaatggtggctgggggaggcgggaggccgacgc
ggctatgtgccttccaactatatccgcaaatcagaatatacatga
DBGET
integrated database retrieval system
