KEGG   Lates calcarifer (barramundi perch): 108898754
Entry
108898754         CDS       T04895                                 
Name
(RefSeq) endoribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108898754
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     108898754
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH zf-CCCH_4
Other DBs
NCBI-GeneID: 108898754
NCBI-ProteinID: XP_018554298
UniProt: A0A4W6DHT2
LinkDB
Position
LG15:8158395..8165815
AA seq 626 aa
MDQVLPSQSSASDQLEPDSEKLQLRVDFFRKLGYSSAEVKAALKKLGLSTDTNSVLGELV
RSRTSTASCKSSSDSDERSSGQKDPLMPASWLSGPRITPQLGDPKNTDTELRPVVIDGSN
VAMSHGNKEVFSCRGIQLAVNFFLDRGHNSITVFVPTWRKEQPRPDAPITDQHILMELEK
RKIVVFTPSRRVGGKRVVCYDDRFIVKLAYESDGVIVSNDTYRDLQGERPEWKKCIEERL
LMYSFVNDKFMPPDDPLGRHGPSLNNFLRKKPLPTEQKRQLCPYDKKCTYGIKCKFYHPE
RTNQSYLSLADELREKAQISTVKEERNARLSPRQSDTGSAHNACPHPRDSNTELIRDRQS
SSHPCHVGENKVVYWEDPRNSSNHMPCSVTGGQCQKDWPGLHSVPNHYYANISHEYLDSG
LGSFESQYSDNSHCLSNSQRLRSQQQSSLAGPRHTSVHLGKNYISHSCSCCSHAVPSTAH
QHHRNMDSKGQPNYPPHMFPPSVPHHHSLPSHVHYSGAPHHQQNYWSDPFQGLPQARTSC
SLSSSVHSSHSHNSCSCSYKGHEYHPWGQQPSSAAFDPQRLELRKKLQAIFNPHEVDTVM
EMFPHLMDAEKLAAKILNLKTQRGIF
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggatcaggtacttcccagccagagctcagcttcagaccagctggaacccgacagcgag
aagctccagctcagagtggacttctttaggaaactgggttactcctcagcagaagtaaag
gctgctctgaagaagctgggtctcagcacagacaccaactcagtgctgggagaactggtc
aggagcaggaccagcactgcatcctgcaagtccagttctgacagtgatgagaggagctca
ggccaaaaggaccctctgatgcctgccagttggctctctggacccagaatcacaccacaa
cttggggacccaaagaatacagacacagaattgagacctgttgtcattgacggtagcaat
gttgcaatgagtcatggaaacaaggaagtgttctcctgccgaggcatccagctggcagtg
aatttcttcctggacagaggtcataatagcatcactgtgtttgttccaacttggcgcaaa
gagcagcccagacctgatgcccccataacagatcaacacattctgatggagcttgaaaaa
cgtaaaatagtggtcttcactccatcgcgtcgagttggtggtaagcgagtggtttgctac
gacgaccgcttcatcgtcaaattggcgtacgagtcagatggcgtgatcgtatccaatgac
acctaccgtgacctccaaggagaaagacctgagtggaagaaatgcatcgaagagaggctc
ctcatgtattccttcgtgaatgacaagttcatgcccccggatgaccctcttggacgccat
ggccccagtctcaacaacttcctaaggaaaaagcctctgcctacagagcagaagagacag
ctctgtccatatgataaaaagtgcacttacggcatcaagtgtaagttttaccatccagag
cgaaccaaccagtcctacctgtccttggctgatgaactgagggagaaagcccagatttct
actgtaaaagaagaaagaaatgccagattatcacccagacagtctgatactgggtctgct
cataatgcttgtccccatcctcgagactctaacacagagctcattagagacaggcaaagt
tcttcacatccctgtcacgttggtgaaaataaagtggtatactgggaggacccaagaaac
agttcaaatcatatgccctgctccgtaacaggaggccagtgtcagaaagattggcctggg
ctgcactcagtgcccaaccattactatgccaacatctctcatgagtacctggattctggt
cttggctcttttgagagccagtactctgataattctcattgcctcagcaactcccagagg
ctcaggtcccagcaacaaagttccctcgctggacccagacacacctcagtgcatttaggg
aaaaattacatcagccactcctgtagttgctgttcccatgcagtgccctcaacagctcac
cagcatcacagaaacatggattctaagggtcaacccaactatcctcctcacatgttccca
ccaagtgtgccacaccaccacagcctccccagccatgtccattatagtggagccccccat
catcagcaaaactactggtcagatccctttcaagggctgccccaagccaggacatcatgt
agtctgtcctcttcagtccattcgtcacactcccacaactcttgctcttgctcttacaaa
ggccatgagtaccatccatggggccaacagccatcttctgctgcgttcgaccctcaaagg
ctggaactccgcaagaaactgcaagccatcttcaacccacatgaggtggacacagtcatg
gaaatgttcccacatctgatggatgcggagaaactggctgcaaagatcctcaacctaaag
actcagagagggatattctga

DBGET integrated database retrieval system