Lates calcarifer (barramundi perch): 108898763
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Entry
108898763 CDS
T04895
Symbol
grik3
Name
(RefSeq) glutamate receptor ionotropic, kainate 3
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108898763 (grik3)
04082 Neuroactive ligand signaling
108898763 (grik3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108898763 (grik3)
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Glutamate (ionotropic)
108898763 (grik3)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
108898763
NCBI-ProteinID:
XP_018554307
UniProt:
A0AAJ7QF37
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Position
LG15:complement(7963484..8054466)
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AA seq
975 aa
AA seq
DB search
MRNTWLSPRSAIWEYWTSLIACLFWIQYSYGMPHVIRIGGIFEQTDGPVSLVSAEELAFK
FAVNNINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAV
QSICNALEVPHIQVRWKHHPMDNRDTFYANLYPDYSSLSYAILDLVQFLKWKTATVVYDD
STGLIRLQELIMAPSRYNIRLKIRQLPLDTQDTRPLLKEMKRSREFRIIFDCSHHMAAQI
LKQAQTMGMMTEYYHYIFTTLDLMAIDLEPYRFCGVNMTGFRILNVDNPQVASIVEKWSM
ERQIPPKPDSGLLEGIMTTDAALTYDAVHIVSVSYQHAPQMTVNSLQCHRHKPWRFGGRF
MSFIKESHWDGLTGRLSFNKTTGLRTDFDLDIISLKEDGLEKVGKWSASGGLNITEVPKR
KGMNITDSLANRSLIITTILEEPYVMLKKSDKALVGNDRFEGFCIDLLKELSNILGFTYE
IRLVPDGKYGSQDDKGQWNGMIRELIEHRADLAVAPLTITYMREKFIDFSKPFMSMGISI
LYRKPNATNNGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSD
VVENNFTLLNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLT
VERMDSPVDSADDIAKQTKIEYGVVKDGATMTFFKKSKVSTFEKMWAFMSSKPSTSLVKS
IEDGIQRVLKSDYALIMESTTIDYITRRNCNLTQVGGLIDSKGYGIGTPLGSPYRDKITI
AILSILEDGRLHMLKEKWWSGSSCLDEERRETGPMGIQNLGGIFIVLASGLVLSVFVAIA
EFIYKLRKTAERDQVFVQCHGGRDQTVVHLREAGEAQASASSHSEDGCSDQHARLQRPTT
PRKGQHELQHWDDSCVPMTMCSPQGKNLLSNVAGAVPETRDNGIDGITRYTINHSDMGTL
TKHGQLKMAASATQV
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatacttggctgtctccccggagtgcgatttgggaatactggacatcgctgatt
gcatgtcttttttggattcagtactcttacgggatgcctcatgttattcgaataggtggg
atttttgagcaaacggatggacctgtttcacttgtgagcgcggaggagcttgcctttaaa
tttgctgtcaataacattaaccgaaacaggactttgttgccaaacacaacattaacatat
gacatacagaggattaatatctacgacagctttgaggcgtcgagaaaagcttgtgaccaa
ctgtctttaggtgtggttgcaatatttgggccctcacatagctcatcgtcaaatgctgtg
cagtccatctgcaatgcattggaagtgccgcacatccaggtgcggtggaaacatcaccca
atggacaacagggacaccttttatgccaatttatacccagactactcatcactaagctat
gctatcctggacctggtgcagtttctcaaatggaaaacagccactgttgtatatgatgac
agcacaggcctgataagactacaggagctgattatggccccgtctaggtacaacatcagg
ctaaagatccgtcaacttcctctcgacacgcaggacacgcgaccccttctcaaagaaatg
aagagaagtcgggagttccgcatcatctttgactgcagtcaccacatggctgcgcagatt
ctcaaacaggcccagaccatggggatgatgacagagtattaccactatatcttcaccact
ctggacctgatggccattgacctggaaccctatcgcttctgtggtgtcaacatgactggc
ttccgcatcctcaacgtggataatccccaggttgcatccattgtggagaaatggtcaatg
gaaaggcagataccacctaaacctgattcaggcctgctggagggcatcatgacgacagat
gcagctctgacctatgatgcagtccacattgtatccgtctcataccagcacgctccacag
atgacggtaaactcactgcagtgccaccgccacaaaccctggagatttggagggcgcttc
atgagtttcatcaaagagtcccactgggatggtttgacggggagactgtcattcaacaag
acaactggtctgcgtacagacttcgacctggacatcatcagtctaaaggaggacggactt
gaaaaggtggggaagtggagtgcgtcaggaggtcttaacatcacagaagtgccgaagcga
aaagggatgaacatcactgattccctggcgaaccgctccctcatcatcaccacaatcctg
gaggagccatatgtcatgcttaagaagtctgacaaggcgctggttgggaacgaccgtttc
gaaggattttgcatcgacttgctaaaagagctctccaacatcttgggcttcacatatgag
atccggctagtgcctgacggaaaatatggctctcaggatgacaagggccagtggaatggc
atgatcagggaacttatagaacatagagcagacttggcagtggctcccctcaccatcacc
tacatgcgtgaaaagttcattgacttctccaagcccttcatgagcatgggtatcagcatc
ctgtatcgcaaacccaacgccaccaacaacggcttcttctccttcctgaaccccatgact
ccagacatctgggtctacatcctcctggcctacctgggtgttagctgtgtcctttttgtt
attgccaggttcagtccatatgaatggtacgacgctcatccttgtaatcctggatcagac
gtggtggagaacaacttcaccctcctcaacagcttctggtttggagtcggttccttaatg
caacaaggctcagaactgatgcccaaagccctgtcgaccaggatcattggtgggatctgg
tggttcttcacgctcattattatatcatcctatacagccaatttagcagcttttctcact
gtggagagaatggactcgcctgtggactcagctgatgacatcgccaagcagacaaagatt
gagtatggtgtggtcaaagatggcgcaaccatgacctttttcaagaaatctaaggtttct
acctttgagaagatgtgggccttcatgagcagcaagccaagcacatcactggtgaagtct
atagaggatgggattcagagggtgctgaagtcagactatgccctcattatggagtccacc
actattgattacattactaggaggaactgtaatctgacacaggtgggagggctcatcgac
agcaaaggctatggcatcggcactcccctcggctccccatacagggacaaaatcaccata
gcaatcctaagcatcttggaggatgggcgcctacacatgctgaaggagaagtggtggagt
gggagcagctgcttggatgaagagcgtcgcgagacaggccccatgggtatccagaacctg
ggtggtatattcattgtgctggcatctggcctagtgctgtctgtttttgtggcgattgct
gaattcatctacaagctgaggaagactgcagaacgtgaccaggtctttgtgcagtgccat
ggtggacgagatcagactgtcgttcacctgcgagaggcgggtgaagcacaagcctcagcc
tccagtcatagtgaagacggatgcagtgatcaacatgcacgcctacaacgaccgacgact
cccaggaaaggacaacatgagctgcagcactgggatgactcctgtgttcccatgacaatg
tgctccccccagggcaagaacctcctgagtaacgtggcaggggcggtgccagagaccaga
gacaatggcatagacgggatcaccagatacaccattaaccacagtgatatggggacacta
acaaaacatgggcaactcaaaatggcagcatcggccacacaggtatga
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