Lates calcarifer (barramundi perch): 108898766
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Entry
108898766 CDS
T04895
Symbol
abcd3a
Name
(RefSeq) ATP-binding cassette sub-family D member 3a isoform X1
KO
K05677
ATP-binding cassette, subfamily D (ALD), member 3 [EC:
7.6.2.4
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf02010
ABC transporters
lcf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108898766 (abcd3a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108898766 (abcd3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108898766 (abcd3a)
Enzymes [BR:
lcf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
108898766 (abcd3a)
Transporters [BR:
lcf02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD3 subgroup
108898766 (abcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_23
SMC_N
AAA_27
Rad17
BrxL_ATPase
Toxofilin-like_dom
AAA_29
AAA_21
AAA_16
nSTAND1
Motif
Other DBs
NCBI-GeneID:
108898766
NCBI-ProteinID:
XP_018554308
UniProt:
A0AAJ7QF99
LinkDB
All DBs
Position
LG24:complement(6677354..6694158)
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AA seq
659 aa
AA seq
DB search
MAAFSKYLTAKNSSIAGGILLVLYLLKHRRRTPKQDGRKGGSDLVLNTEKDGRKDRAAVD
KVFFLRIIRILRIMVPRVFCMETGYLILIAAMLVARTYCDVWMIQNGTMIESAIIGRSTK
DFKTYLFSFIKFMPLIALVNNFLKLGLNELKLRCRERLTKKLYDEYLQGYTYYKMGNLDN
RIANADQLLTQDVEKFCNSVVDLYSNLSKPLLDIGLYIFKLTSAIGAQGPAIMMAYLLIS
GLFLTRLRRPIGKMTVTEQRYEGEYRYVNSRLITNSEEIAFYNGNMREKQTIHATFKKLV
DHLHNFIFFRFSMGFVDSMIAKYLATVVGYLVVSRPFLNLSHPRHLHSTHSELLEDYYQS
GRMLLRMSQALGRIVLAGREMTRLSGFTARITELMKVLKELNAGKYERTMVSQQEKESDT
AEKLTLVPGSGQIINRDNIIKFEHTPLATPNGDILIRDLTFEVRSGTNVLVCGPNGCGKS
SLFRVLGELWPLFGGHLTKPERGKLFYVPQRPYMTLGSLRDQVIYPDTYEEQRRKGISDQ
VLKEYLDNVQLGHILDREGSWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSA
VSVDVEDYIYSHCRTVGITLFTVSHRKSLWKHHEYYLHMDGRGNYEFKPITEETVEFGS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctttagtaaatatctgactgcgaaaaactcttccatagcaggcggcattttg
ctggttctatacctcctgaaacacagaagacggacgcccaaacaggacggtagaaaagga
ggctcagatcttgtgctgaacactgagaaagatggcagaaaagaccgtgcagcagtggac
aaggttttcttccttcgaatcatccggattctgcggatcatggtacctcgtgttttctgc
atggagactggctaccttatccttatcgccgccatgttggtggccaggacctactgtgat
gtgtggatgatccagaacggcaccatgattgaaagtgcaattatcggtcgatcgacaaaa
gatttcaagacctacttgttcagctttatcaaattcatgccacttattgccttggtgaac
aacttcctgaagctgggcctaaatgaactgaaactgaggtgtcgtgagaggctcacaaag
aaattgtacgacgagtacctgcaaggttacacctactacaaaatgggaaacctggacaac
cggatagccaatgcagaccagctgctgacacaagatgtggagaaattctgcaacagtgtg
gtggacctttactccaacctcagcaagcctctgttggatattggtctgtacatcttcaag
ctgacaagtgccattggtgctcagggcccagctatcatgatggcctacttgctgatctca
ggtctgttcctgaccagattgaggaggccaatagggaagatgacagtcaccgagcagcgc
tacgagggagagtaccgctacgtcaactcccgcctcatcactaacagtgaggagattgcc
ttctacaatggaaacatgagggaaaaacagaccatccacgccacattcaagaaactggtg
gaccacttacataacttcatcttctttcgcttctccatgggatttgttgacagcatgatt
gccaagtacctggccactgtggtgggctacctggtggttagccgcccgttcctaaacctg
tcccacccccgacacctgcacagcacacactcagagctgctggaggactactaccagagt
ggcaggatgctcctaagaatgtcccaggcactgggcaggattgtactggctggccgagag
atgacccgcctctcaggattcacagctcgcatcactgaacttatgaaagtcctgaaggag
ctgaatgctggcaaatatgaacgcaccatggtctcccagcaggagaaagaatcagacact
gctgagaaactcacactagtgcctggaagtggtcaaattatcaacagagataacatcatc
aaatttgaacataccccactagcaacacccaatggagacatcctgataagagacctcaca
tttgaggtaaggtctggcaccaatgttcttgtgtgtggcccaaatggctgtggcaagagc
tctctgttcagagtgcttggagagctgtggcctctgtttggaggacacctgacaaaacct
gagagagggaagctcttctatgtcccacagagaccctacatgactctgggttctctgagg
gaccaagtcatttaccctgacacctatgaagagcagaggaggaaaggcatctctgatcag
gtgttgaaggaatatctggacaatgttcaactgggtcacatcctggacagggagggcagc
tgggactcagtccaggactggatggatgtcctcagtggaggagagaagcagaggatggct
atggccagactgttctaccacaagccccagtttgccattctggatgagtgcaccagtgca
gtgagtgtggatgtggaggattacatctacagccactgcaggacggtgggcatcaccttg
ttcacagtgtctcacagaaagtccctgtggaagcaccatgagtactatctccacatggac
gggagaggaaactacgagttcaagcccatcacagaggaaactgtagagtttggctcataa
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