Lates calcarifer (barramundi perch): 108898818
Help
Entry
108898818 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: immunoglobulin superfamily member 11-like
KO
K06791
immunoglobulin superfamily, member 11
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108898818
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108898818
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
CTX family
108898818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
Ig_2
ig
I-set
C2-set_3
Sp38
DUF2448
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
108898818
NCBI-ProteinID:
XP_018554402
LinkDB
All DBs
Position
LG21:complement(3664228..3753781)
Genome browser
AA seq
481 aa
AA seq
DB search
MVKFHNSDLWIAWMVIFCMEGSRFDLHTGKVCVRALDVTVSQSSIQVARGQAAILPCSFT
TSAALNNLNIIWMVIPLSNANQPEQVIIYQGGQVFSLANHLNGRVGFVATMPSTSASIFI
NNTQLSDTGTYQCLVNNLPDRGGRNIGVIGLTVLVPPSVPACRIQGTLDVGSDIMLLCSS
EEGIPTPSYSWEKLDTLPKLPHNAMQDQMQGTVTLRNISTSTSGLYQCTSSNAIGKSTCL
LNLQVVAPQPQSVGLIAGTIATGVLAVIICSLLVVVTLFYWKNKNKYDEEEIPNEIREDD
LPPKRSSSVKAFHADASSSENDTLTSTNTYNSRYWHNPKPNYDTNSYTRYNGDTRQTFST
AAHGAHGHGQAQNAGHGHSTVVTAPGSAPLSRHAQPTTATTTSFANGSHTLPPPKTLVVT
TNSAPSPPTMVRSNGSVSLKPVVTSTHGQHTHSYAVSQATLERMGAVPVMVPAQSRAGSL
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtttcataactcggacctatggatagcctggatggtcatcttctgcatggag
ggttcaaggtttgatctacacacggggaaagtgtgtgtgcgggcgctggatgtgacggtg
tcccagagcagtattcaggtggcccgcggccaagcagccatcctgccctgctctttcacc
accagtgctgccctcaacaacctcaacatcatctggatggtgataccgctgtccaacgcc
aaccagccagaacaggtgataatttaccagggtggccaggtgttcagcctcgccaaccac
ctcaacggtcgtgtgggcttcgtggccaccatgcccagcacaagtgcctccatcttcatc
aacaacacccagctgtccgacactgggacctaccagtgcctggtcaacaacctcccagac
agaggggggcgcaacatcggcgtcatcgggctcactgtgttggtgcccccctcggtgcca
gcatgtcgaatccagggcacactggatgtaggcagtgacatcatgctgctctgcagctca
gaggaaggtattcccacgccatcctactcctgggagaagctggacacactgcccaagctg
ccgcacaacgccatgcaagaccagatgcagggcaccgtcacgctgagaaacatcagcacc
agcacctcaggactctaccagtgtacctccagcaatgctattggcaagagcacctgtctg
ctcaacctgcaggttgtagcaccacaacctcagagtgtaggtctaatagcagggaccatt
gctacaggagtcctggctgtcatcatctgttccctcttagtggtggtcacactcttctac
tggaagaacaagaacaaatacgacgaggaggagattcccaatgagatcagagaggatgac
cttcctcctaagagatcatcatcagtgaaggctttccacgcagacgcctcatcctcagag
aacgatacactgacatctaccaacacatacaacagccgttactggcacaaccccaaaccc
aactatgacaccaactcctacactcgctacaatggagacacacgtcagaccttctccact
gctgcccatggcgcacacgggcacggacaggcccagaatgcaggacacggccacagtacg
gtggtcacagcacccggctcagcaccactgtcccgccatgcgcagcccacaacagcaaca
acaacatcatttgccaatggcagccacacgctcccacctcccaagactctggtggtcaca
acaaactctgccccatcccctcccaccatggtgcgcagcaatggctctgtgagcctcaaa
cctgtggtgacgtccacacatgggcaacacacacactcctacgctgtgagccaggccaca
ctggaacggatgggggcagtgcctgtcatggtgcctgctcagagcagagcaggctcgctg
gtctga
DBGET
integrated database retrieval system
