Lates calcarifer (barramundi perch): 108898861
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Entry
108898861 CDS
T04895
Name
(RefSeq) kin of IRRE-like protein 3 isoform X1
KO
K25874
Kirrel/Neph family protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108898861
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108898861
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
Other
108898861
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_VEGFR-1-like_5th
C1-set
Ig_4
Izumo-Ig
PH_2
Motif
Other DBs
NCBI-GeneID:
108898861
NCBI-ProteinID:
XP_050921400
UniProt:
A0AAJ8DJI4
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Position
LG21:4779045..4983412
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AA seq
806 aa
AA seq
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MCLCLPTSISHSPTVFCRFCPLHSPVMIPWVLLLLWIAGHDAEAMFSQQPQDLVVVAGQP
VTLPCTIPGYHGVVLWIKDGLALGVGRDLSGYPRYTVIGDHGSGEHHLRIQRVELMDDAV
FECQAVQAAMRSRPARLTVLVPPEDPVISGGPVVSLRAGDPLNLTCHADNAKPAASIIWI
RNGEVLNGAMYSKVSIETLLRDGRRESTVSTLYLSPSNIETGQQIICKASNKAVPNGKET
SVTIDIQHLPLVNLSVEPQPVLEGNLVKFHCSAKANPPVTLYRWAKGGSIIKEVSGDTYE
VIVDHSFFTEPVSCEVTNPLGSTNISRNVDVYFGPRMAAEPQSLQVDLGSDAVFNCAWTG
NPSLTIVWMKRGSGVVLSNENLLTLKSVRQEDAGKYVCRAVVPRVGAGEKEVSLTVNGPP
TISSTQTQQALHGEKGQIKCFIRSTPPPDRIAWSWKETVLESGTSGRYTVETVTTEEGVI
STLTMSNIVPADFQTIYNCTAWNSFGSDTEIIRLKEQGGSQESLPVAVIIGIAVGAFVAL
IVLMGTIGAFCCTRSQRKEAHLVMPSLPVSICAHQRELASKIKTENLKGVVSAKNDIRVE
IVHKDHNAARENEEHTSMKQLMVSVERGEFQQESVLKQLEVLQEEEKEYQHIKDPTNGYY
SVNTFKEHHTPTMTGNQSTEVRNPANTGTLGKQRVPTGMSFTNIYSTLGAGPNRLYDYSQ
RFVLGMGSSSIELCEREFQRGSLSDSSSFIDTQCDSSVSSYSKPDGYVQFDKDSKASASS
SSHYSQSSSQNSDLTRPLQKRMQTHV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttgtgcctgccaacttcaatttcacactcgcccactgttttttgtaggttttgc
cctctccactccccagtcatgatcccttgggtccttctgctcctgtggatcgccggacat
gatgcagaggccatgttttcccagcagccacaggacctggtggtggtagcaggccagcct
gtgacattaccgtgcactatccctggttaccatggcgttgtcctgtggatcaaagatggg
ctggcgctgggagttggcagagacctctctggctatccacgttacacagtgattggcgac
cacggttcaggggagcatcatttgcgaatccagcgtgtcgagctgatggatgacgctgtg
tttgagtgccaggctgtccaggctgccatgaggtcccgtcctgcccgtctcactgtgctg
gttcccccagaggacccagtcatcagtggagggccggtggtgagcctacgggctggcgac
ccactcaatctgacctgccatgctgacaacgccaagccagcagcctcaatcatctggatc
cgcaatggagaggtccttaatggggccatgtactccaaggtaagcattgagaccttgctc
cgggatggcagaagagaaagcaccgtgagcaccctctacctatcgccttccaacatcgag
acaggtcagcagatcatctgtaaggcctccaacaaggcagtccccaatggcaaggagacc
agtgtcacaattgacatccagcatctcccacttgtcaatctctcagtggaacctcagcct
gttctggagggtaacctcgtgaaattccactgctctgcaaaggccaaccctcctgtcaca
ctctacaggtgggccaaaggaggaagtataatcaaggaggtctctggagacacgtatgag
gtcattgtggaccactccttctttacagaacctgtttcctgcgaggtcaccaaccctctc
ggcagcaccaacattagtcgcaatgttgatgtttactttggccctcgcatggctgcggag
cctcagtccttgcaagtggaccttggatctgatgctgtgttcaactgtgcatggacagga
aatccctctcttaccatagtgtggatgaagaggggatctggagtggttcttagcaatgag
aacctcctgacactgaaatctgtgagacaggaggatgctgggaaatatgtttgccgcgct
gtggtcccccgtgtaggagcaggggagaaggaggtttctctcactgtcaatgggccacct
actatttccagcacacagactcagcaggctttacatggagaaaaaggacaaatcaaatgt
ttcattcgaagtacacctcctccagaccgcattgcttggtcatggaaggaaactgtactg
gagtctggaacatccggccgctacaccgtggagacggtcaccacagaggaaggagtaatc
tccacactgaccatgagcaacattgttccggccgacttccagaccatctacaactgcacc
gcgtggaacagctttggctctgacaccgagatcatacgcctcaaggaacaaggtgggagc
caagaatctctcccagtggcggtgatcatcggcattgctgtgggagcttttgtggccctt
attgtcctcatgggcaccattggagcgttctgttgcactcgctcccagagaaaggaagcg
cacctggttatgccctcactgcccgtctccatctgtgctcaccagagagaacttgcaagc
aaaattaagacagaaaatctgaagggagtcgtgtcggcgaaaaatgacatccgcgtggag
attgtgcacaaagaccacaatgcagcgcgagaaaacgaagaacacacctccatgaaacaa
ctgatggtgagtgttgaacgtggagagttccagcaggagtctgttctgaagcagctcgag
gtattacaagaggaagagaaggagtatcagcacattaaggacccaacaaatggctattac
agtgttaataccttcaaggagcaccacacacctaccatgacagggaatcaatccactgag
gtgagaaaccccgccaacacaggtaccctgggcaagcagcgagtaccaacgggcatgtcc
ttcaccaacatctactccactctgggagcaggccccaaccgcctgtatgactacagccaa
cgtttcgtgctgggcatgggaagcagctccattgagctatgcgagcgggagttccagcgt
ggctcactcagcgactcaagctcctttatcgacacgcagtgtgacagcagcgtcagcagc
tacagtaagccggacggctacgtgcagttcgacaaagacagcaaggcatcagcctcttcc
tcctcccactattcccagtcctcctcgcagaactcagacctcacacggcctctccagaag
cgtatgcagacccacgtctga
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