Lates calcarifer (barramundi perch): 108898877
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Entry
108898877 CDS
T04895
Name
(RefSeq) inositol 1,4,5-trisphosphate receptor type 1 isoform X1
KO
K04958
inositol 1,4,5-triphosphate receptor type 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04070
Phosphatidylinositol signaling system
lcf04114
Oocyte meiosis
lcf04140
Autophagy - animal
lcf04210
Apoptosis
lcf04218
Cellular senescence
lcf04270
Vascular smooth muscle contraction
lcf04371
Apelin signaling pathway
lcf04540
Gap junction
lcf04621
NOD-like receptor signaling pathway
lcf04625
C-type lectin receptor signaling pathway
lcf04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
108898877
04020 Calcium signaling pathway
108898877
04070 Phosphatidylinositol signaling system
108898877
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108898877
09143 Cell growth and death
04114 Oocyte meiosis
108898877
04210 Apoptosis
108898877
04218 Cellular senescence
108898877
09144 Cellular community - eukaryotes
04540 Gap junction
108898877
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108898877
04625 C-type lectin receptor signaling pathway
108898877
09152 Endocrine system
04912 GnRH signaling pathway
108898877
09153 Circulatory system
04270 Vascular smooth muscle contraction
108898877
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108898877
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108898877
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108898877
Ion channels [BR:
lcf04040
]
Ligand-gated channels
IP3 receptor
108898877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ins145_P3_rec
RYDR_ITPR
MIR
RIH_assoc
Ion_trans
OVT1
Motif
Other DBs
NCBI-GeneID:
108898877
NCBI-ProteinID:
XP_050930584
UniProt:
A0AAJ8DTJ8
LinkDB
All DBs
Position
LG12:13965241..14049071
Genome browser
AA seq
2784 aa
AA seq
DB search
MSDKMSSFLHIGDICSLYAEGSTSGFISTLGLVDDRCVVQPDTGDLNNPPKKFRDCLFKL
CPMNRYSAQKQFWKAAKPGGNSTTDTVLLNKLHHAADLEKKQNESENRKLLGTVIQYGNV
IQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDSAGNEGSWFYIQPFYKLRSLGDSVVIGD
KVVLNPVNAGQPLHASSHQLVDNPGCNEVNSVNCNTSWKVVLFMKWSDNKETILKGGDVV
RLFHAEQEKFLTCDDHRKKQYVFLRTTGRQSATSATSSKALWEVEVVHHDPCRGGAGYWN
SLFRFKHLATGCYLAAEVGEVNPDFEEENAEQRSSVVDFTPFNFQLDADNEALRGRLRAP
QEKIMYTLVPVPDGMDISSIFELDPTTLRGGDSMVPRSSYVRLRHLCTNTWVHSTNNPID
KEEEKPVMLRIGTSAVKEDKEAFAIVPVPPAEVRDLDFANDASKVLASIAGKLEKGTITQ
NERRFVTKLLEDLVFFVVDIPNSGQDVLEIMVNKPNRERQKLMREQNILKQIFKLLQAPF
TDSGDGPMLRLEELGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYIAKQFRFMQKQIGY
DVLAEDTITALLHNNRKLLEKHITAAEIDTFVTLVRKNREPRFLDYLSDLCVSMNKSIPV
TQELICNAVLDPTNADILIETKLVLSRFEIETTTNGENPVEAEDEEEVWLFWKDNCKEIR
SKSIRELAQDAKEGQKEDQEVVSYYRCQLNLFARMCLDRQYLAINKISGQLDVDLILRCM
SDEDLPYDLRASFCRLMLHMHVDRDPQEQVTPVKYARLWSEIPSKIAIDDYDNDGTTRDE
IKERFCLTMDFVENYLREVVSQNIPFSDKEKNKLTFEVVNLARNLIYFGFYNFSDLLRLT
KILLNILDCVHVSTIYPINKMEKGEENKAGSNVMKSIHGVGELMTQVVLRGGGLLPTTPT
HQPEGDVVKTQTEPEREDIMVMDTKLKIIEILQFILNVRLDYRISCLLCIFKREFDENNP
QGDNIATQNGINNVTGQMPGNLDFENIEEQAEGIFGGSEENTPLDLDDHGGRTFLRVLLH
LTMHDYPPLVSGALHLLFRHFSQRQEVLMAFKQVQLLVTSQDVDNYKQIKSDLDQLRSIV
EKSELWVYKRQGEDGMDGDGPSESDNKKKGDSLGSDKKKTESTSSYNYRVVKEILLRLSK
LCVQEGSSGKKSKKQQQRLLRNMGAHCVVLELLQIPYEKGEDVRMQEIMKLAHEFLQNFC
AGNQQNQALLHKHINLFLNPGILEAVTMQHIFMNNFQLCSEINERVVQHFVHCTETHGRH
VQYLKFLQTIVKAENKFIKKCQDIVMAELVNSGEDVLVFYNDRASFQTLVQMMRSERDRM
DENSPLMYHIHLVELLAVCTEGKNVYTEIKCNSLLPLDDIVRVVTHEDCIPEVKIAYINF
LNHCYVDTEVEMKEIYTSNHMWKLFENFLVDICRVCNNTSDRKHADTMLERYVTETVMSI
VTCFFSSPFSDQSTSLQTRQPVFVQLLQGVFRVYHCNWLNPVQKASVEACIKVLSDVAKS
RAIAIPVDLDSQVNNLFVKSNNVVQKSILNWRLSAKNTSRRDSGLTTSKDYRNIIERLQD
IVSALEDRLRPLVQAELSVLVDVLHRPELLFPENTEARKKCESGGFISKLIKHTKQLLEE
NEERLCIKVLQTLREMMTKDRGYGEKLIAFDDEMDVAELAPPPEPEVPAEELDPNQPQKQ
LEDQRRGEALRQILVNRYYGNVKPGQRRDSVTTFSNGPLTSGAQGKSPTVVSSGIGGRGE
LSLAEVQCHLDKEGASDLVIDLIMNATSDRIFQESILLAIALLEGGNTVIQRSFYHRLTG
DNKSEKFFKVFYERMKLAQQEIKATVTVNTSDLGSKKKDEEPPDKDTPARKKVKDLPVVA
VVTEEVKEQLVEASAVTKKAFTTYRREAEAEEHQAAADGSPVPTADKGQEEGEMSVVITI
MQPILRLMQLLCENHNRDLQNFLRNQNNKNNYNLVCETLQFLDCICGSTTGGLGLLGLYI
NEKNVGLINQTVESLTEYCQGPCHENQNCIATHECNGIDIIIALILNDINPLGKKRMDLV
LELKNNASKLLLAIMESRHDSENAERILYNMRPKELVEVIKKAYMQGEIEVEEPQEGEDG
EEEHSASPRNVGHNIYILAHQLARHNKELQAMLKPGGTYGEGDEALEFYAKHTAQIEIVR
LDRTMEQIVFPVPNICEFLTQESKLRVYYTTERDEQGSKINDFFLRSEDLFNEMNWQKKL
RGTQEATGNTNTVPSQPILYWCSRNMSFWSSISFNLAVLMNLLVAFFYPLEGVRGGTLEP
HLSALLWMAMLVSLAIVIVLPQPHGIRALIASTILRLIFSVGLEPTLLLLGGFNLCNKVI
FLMSFVGNRGTFTRGYKAMIMDVEFLYHLLYLIICTLGVFVHVFFYSLLLFDLVYREETL
LNVIKSVTRNGRSIVLTAVLALILVYLFSIVGYIFFKDDFILAVDRIPNKTLEHGASMVG
EFFSGGVCQKENRENCSGEAAMDASLAIQPSAVVIEDKERTCDSLLMCIVTVLSHGLRSG
GGVGDVLRKPSKEEPLFAARVIYDLLFFFMVIIIVLNLIFGVIIDTFADLRSEKQKKEEI
LKTTCFICGLERDKFDNKTVTFEEHIKVEHNMWHYLFFIVLVKVKDSTEYTGPESYVAEM
IREHNLDWFPRMRAMSLVSSDADGEQNEIRNLQEKLESTMKLVSNLSGQLTELKEQMTEQ
RKQKQRIGLLGHPQHMNVNPQQPA
NT seq
8355 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagatgtccagtttcctccatattggggacatttgttccctgtatgcagag
ggctccaccagtggatttattagcaccttaggcctcgtggatgaccgttgtgtggtacaa
ccggacacaggcgacctaaacaacccacccaagaaattcagagactgccttttcaaactg
tgtcctatgaacagatactcagcacagaaacagttctggaaggcggcaaaacctggaggc
aacagcaccactgacacagtcctccttaacaaactccatcatgctgctgacctggagaag
aagcagaatgagtctgaaaaccgcaagctgctgggaacagtcatccagtatggaaatgtc
attcagctgctgcacttgaaaagcaataaatacctgacagtgaacaagcgcctacctgca
ctgttggagaagaatgccatgagagtgactctggactcagcgggaaacgagggatcctgg
ttctacatccagcccttctacaagctgcgatccctgggagacagtgtggtgataggagat
aaagtggttcttaaccctgtgaatgcgggacagcctctacatgccagcagccaccagcta
gttgacaatccaggatgcaatgaggttaattctgtaaactgcaacacaagttggaaagtt
gttctgttcatgaaatggagtgacaacaaggaaacaatacttaaagggggtgatgtggtg
cggttgttccacgcagagcaagagaagttcctcacatgtgacgatcacaggaagaagcag
tatgtctttctcagaaccactggccggcagtcagccacttctgccaccagcagcaaagcg
ctgtgggaagtagaggtggtccaccatgacccatgtaggggaggtgcaggctactggaac
agcctgttcaggtttaaacacttggccacagggtgttatttggctgctgaggtgggtgag
gtgaacccagactttgaggaggagaatgctgagcagcggtcctcggtggtggactttaca
ccttttaatttccagctggatgcagataatgaagcgttgcggggtcgtttgcgagctccc
caggagaaaatcatgtacactctggtgccagttcctgatggcatggatatctcctccatc
tttgagctggatcctaccacgctgagaggcggtgactccatggtgcccaggagttcctat
gtgaggctaagacacttgtgtaccaacacttgggtccacagcaccaacaaccccattgac
aaagaggaggagaagcctgttatgttacggattggaacatcagcagtaaaagaagacaag
gaagctttcgccattgtaccagttccgccagcagaagtgcgtgatttagactttgctaat
gatgcaagtaaagtgttagcatctattgctggcaagctggaaaagggtaccataacacaa
aatgaaaggaggtttgtgaccaagcttcttgaagatctagttttcttcgtggtggacatc
cccaacagtgggcaggatgttttggagatcatggttaacaaacccaacagagaaagacag
aaactcatgagagagcagaatatccttaaacagattttcaaacttctccaggcacctttc
acagatagtggtgatggtcccatgctccgattggaagaacttggagaccagcggcacgct
ccttttagacatatttgcaggctttgctacagagtgttacgccattcccagcaggattac
aggaagaaccaggaatacatagccaaacaatttcgcttcatgcagaagcagataggatat
gatgtgttagcagaagacacaataacagctctgctccacaacaaccggaagctattggag
aaacatatcactgctgctgagatagacacatttgtcactctagtgaggaagaatcgggaa
ccaaggtttctggactacctgtcagatctctgcgtgtccatgaataagtccatccctgta
acacaggagctaatctgcaatgcagtgctggaccctaccaatgctgacatcctcattgaa
accaaactggtcctgtcgaggtttgagatcgagacaacaacaaatggggagaacccagta
gaggcagaggatgaggaggaggtgtggttgttttggaaagacaattgtaaggaaattcgg
agtaagagcattagggagttggcccaggatgcaaaagagggccagaaggaggaccaggag
gtggtcagctactacaggtgccagctgaacctctttgcccgaatgtgcctggaccgtcag
tacctggccatcaacaagatctctggtcagctcgatgtggacctaatcctgcgctgtatg
tctgatgaggacctgccctatgacttgcgggcctctttctgccgcctgatgctgcacatg
catgttgaccgtgaccctcaggagcaggttacacctgtcaaatacgctcgtctttggtct
gagattccttctaagatcgctattgatgactatgacaacgatggaaccaccagagatgag
atcaaagagcggttctgcctcacaatggattttgtggagaactacctcagggaggtggtg
tcgcagaacattcccttctctgacaaggagaaaaacaagcttacctttgaggtagtgaac
ctggcaaggaacctcatatacttcggtttctacaactttagtgacctgctccgactgaca
aagatcctactgaacattttagactgcgtacatgtcagtaccatatatcccatcaacaag
atggagaagggagaggaaaacaaagctggcagcaatgtgatgaagtccattcatggagtg
ggggaactgatgacccaggtagtactgcgaggaggtggtttgttgcccaccacaccaact
catcagcctgagggagatgtggtcaaaacacagactgaaccagagagagaagacatcatg
gtcatggacactaaactcaagatcattgagattctgcagtttattttgaatgtgaggctt
gactacaggatctcctgcctgctctgtattttcaaacgtgagtttgatgagaacaatcca
caaggagacaacattgccactcagaacggaatcaataatgtcacaggtcagatgccagga
aatcttgactttgagaacatcgaggaacaggcggaggggatctttggaggaagtgaggag
aacactccactagacctggatgaccatggcggccgtaccttcctaagagtcctgctgcac
ctgaccatgcatgactaccctcctctggtgtctggagcgcttcacctgctctttagacac
ttcagccagaggcaggaggtcctcatggccttcaaacaagtccagctgctggttacaagt
caggatgtggataactacaaacagatcaagtcagatctggaccagctacggtctattgtg
gagaagtctgaactgtgggtgtacaaaaggcaaggagaggatgggatggacggagatgga
ccttcagagtctgacaacaaaaagaagggagactcacttggttcagacaaaaagaagaca
gaaagtaccagcagttacaactacagggttgtaaaagagatcctgctgcgcctcagtaag
ctgtgtgtccaggaggggagctcagggaagaagagtaagaaacagcagcagaggctgctg
aggaacatgggagctcactgtgtggtgcttgagctcctgcagatcccctatgagaagggt
gaggatgtcagaatgcaggagatcatgaaactggctcacgagtttctgcagaatttctgc
gcagggaatcagcagaaccaggctcttcttcacaagcatatcaacttgtttcttaaccca
gggatcttagaggcagtcacaatgcagcacatcttcatgaataacttccagctgtgcagt
gagatcaatgagcgtgtggttcaacactttgtccactgcactgagactcatggccgtcat
gtccagtatctgaagttcctgcagaccatagtgaaggccgagaacaagttcatcaagaaa
tgtcaggatattgtcatggctgagctggtgaactcaggtgaagatgttctggtcttctac
aacgatcgtgcctcctttcaaacactagtccaaatgatgcgttcagagcgggaccgcatg
gacgaaaacagccctctgatgtaccacatccacctggtggagctgctggctgtctgcact
gagggcaagaacgtgtacactgagatcaagtgtaactccctgctgcccttagatgatatt
gtgcgggttgtcacccatgaagactgcatccctgaggttaagattgcctatatcaacttt
ctcaaccactgctatgtcgacacagaggtggagatgaaggagatttatacatccaaccat
atgtggaagctgttcgagaacttcctggtggacatttgtagggtgtgcaacaataccagt
gacaggaagcatgcagataccatgcttgagcgttatgtaacagagacagtcatgagcatt
gtcacatgtttcttcagctctcctttctctgaccagagcacaagcctgcagactcgtcag
ccagtatttgtacaactacttcagggtgtgttcagggtttaccactgtaactggctgaac
cctgttcagaaggcctcagtggaggcttgcattaaagtactctcggacgtggctaaaagc
agagccattgctatcccagttgacctggacagtcaggtgaacaacttgttcgtcaagtcc
aataatgttgtgcaaaagagcatcctcaactggagactctcggctaagaacacttccaga
agagactctggcctgactacttccaaagactacagaaacatcattgagaggctgcaggac
atagtatcggcgttggaggaccgtctgaggcctctagtccaagctgagctctcagtactc
gtggacgtcctgcatcgtccagagctgctcttccccgagaacacggaagctcgcaaaaag
tgtgaaagtggaggattcatatcaaaactgatcaaacacaccaagcagttgctggaggag
aatgaggagcgtctgtgcatcaaagtactgcagacactaagggaaatgatgacaaaagac
cggggctatggggagaagctgattgcctttgatgatgaaatggatgtggctgagctggca
cctccaccagagcctgaagtccctgctgaggagcttgatcccaaccagccacagaagcaa
ctggaggatcaaaggaggggagaagctctgcggcagatcttggttaatcgatactacggg
aatgtcaaacctggtcagaggagggatagtgtcacaaccttcagcaatggtccactcacc
tctggagcgcagggaaaatcacctacagttgtcagctccggaattggaggtcgaggggag
ctgagtctggcagaggtccagtgccacctggacaaagaaggggcctctgatctggtcatt
gatctcatcatgaacgctaccagcgaccgaatcttccaagagagcatactgttagccatt
gcactgctggagggtggaaacacagtcatccagcggtcgttctaccaccgtttaacgggg
gacaacaagtctgagaaattcttcaaggtcttttacgagcgcatgaagctggcccagcag
gagatcaaagccactgtaacagtcaatactagtgacctgggcagcaagaagaaggacgag
gagccaccagacaaagacacgcctgcacgcaagaaagtgaaagacctgccagtggtggca
gtggtgaccgaggaggtgaaggagcagctggtggaggcctcagccgtcaccaagaaggcc
tttacgacctaccggcgcgaggccgaggccgaagaacaccaagcagccgccgacggttct
cctgtcccgactgctgataagggccaggaggaaggcgagatgagtgttgtcatcaccatc
atgcaacccatcttgcgtctcatgcagctgctctgtgagaaccacaacagagatctacag
aactttctgcgcaatcagaataacaagaacaactataatctggtgtgcgagaccctccag
ttcctggactgtatttgtggaagtacaacaggaggactgggcctgctgggactttacatc
aatgagaagaatgtaggactcatcaaccagactgtggagagcctgactgagtactgccag
ggtccctgtcatgaaaaccagaactgcatcgccacccatgaatgcaacggcattgacatc
atcattgctctcatcctcaatgacatcaacccccttggcaagaagagaatggatctggtg
ctggaactcaaaaataatgcctccaagctgcttcttgcaattatggagagtcgccatgac
agcgagaacgctgagaggatactgtacaacatgaggcctaaagagctggtggaagtgata
aaaaaggcctatatgcagggagagatagaggtggaggagccacaggagggtgaggatgga
gaggaggagcactctgcgtctccacgcaacgttggtcataatatctacatcttggcacat
caattagcccgtcacaacaaggagctacaggctatgttgaagccagggggcacgtatgga
gagggtgacgaggctcttgagttctatgccaagcacacagctcagattgagattgtacga
ctagatcgcaccatggagcagatagtctttcctgtgcccaacatctgcgagttcctcacc
caagagtccaagctgcgtgtctactataccacagagcgggatgagcagggtagcaagatc
aatgacttcttcctgcgctccgaggacctcttcaatgaaatgaactggcagaagaagctg
cgaggtactcaagaggctactggtaacacaaacacagttccctcccagcccatcctgtac
tggtgctccaggaacatgtcattctggagcagcatctccttcaacctggctgtgctcatg
aacctacttgtggccttcttctaccctctggagggtgtccgtggaggtaccctggagccc
catctatctgccctgctgtggatggccatgctggtgtctctggctatagtcatcgtcttg
cctcagcctcatggtatccgggcactcatcgcctccaccattctgcgcttgatcttctct
gtaggcctggagcccactttgcttctgctggggggtttcaatttatgtaataaggtaatc
ttcctgatgagctttgttgggaaccgaggaaccttcacccgtggctacaaagccatgatc
atggatgtggagttcctgtaccacctgctctacctgattatctgcaccctgggggtcttt
gtccatgtcttcttttacagcttgctgctctttgatctggtttaccgagaagagaccttg
ctgaacgttataaagagtgtgacccgcaatggccgctccattgttctgacagccgtgctg
gctcttatcctcgtctacctcttctccattgtgggttatatcttcttcaaagatgatttc
attttggctgtggacagaatacccaacaaaacactagaacatggagccagtatggtggga
gagttcttctctggtggagtgtgtcagaaagaaaacagggaaaactgttcaggagaggcc
gccatggatgcttcccttgccatccagccgtcggcggtggtgatcgaggacaaggagcga
acgtgtgactccttgctcatgtgcattgtcacagtattgagtcacggcctcaggagtgga
ggaggtgttggggacgtcctacggaagccatccaaagaggaacccctttttgcagccaga
gtgatctacgatctgctcttcttcttcatggtcatcattattgtcctcaacctcatcttt
ggtgtcatcattgatacttttgctgacctgaggagtgagaagcagaagaaagaggaaatc
ctaaagacaacatgttttatttgtgggttggagcgggacaagtttgacaataagacagtt
acctttgaagaacacatcaaagtcgagcacaacatgtggcattacctgttcttcatcgtt
ctggtgaaggtgaaggattccacagagtacactggaccagagagctatgtagctgaaatg
atcagggagcacaacttggactggttcccacggatgcgggccatgtccttggtcagtagc
gatgcagatggagaacagaacgagatcagaaacctgcaggagaaactggagtccaccatg
aaattggtgtcgaacctctcgggccagctgacagagctcaaagaacagatgacagaacag
aggaagcagaagcagcggattggcctgctgggacaccctcagcacatgaacgtcaacccc
cagcagcccgcataa
DBGET
integrated database retrieval system
