Lates calcarifer (barramundi perch): 108898906
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Entry
108898906 CDS
T04895
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108898906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108898906
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108898906
03012 Translation factors [BR:
lcf03012
]
108898906
04131 Membrane trafficking [BR:
lcf04131
]
108898906
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108898906
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108898906
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108898906
Translation factors [BR:
lcf03012
]
Eukaryotic type
Elongation factors
108898906
Membrane trafficking [BR:
lcf04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
108898906
Exosome [BR:
lcf04147
]
Exosomal proteins
Proteins found in most exosomes
108898906
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
108898906
NCBI-ProteinID:
XP_018554555
UniProt:
A0A4W6DRV0
LinkDB
All DBs
Position
LG3:18673756..18680548
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEASDKMAWFKGWKIDRKEGGANGITLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPPNLTTEVKSVEMHHESLP
EALPGDNVGFNIKNVSVKEIRRGNVAGDSKNDPPLAAENFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIITMVPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKSVEKKAASGGKVTKSAQKAEKKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaaaagacccacatcaacattgtggtcattggccatgtcgactccggcaag
tccaccaccaccggacacctgatctacaaatgcggaggaatcgacaagagaaccatcgag
aagttcgagaaggaagccgctgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggcagagcgtgagcgtggtatcaccattgacatcgctctgtggaagttt
gagaccagcaagtactacgtgaccatcattgatgcccctggacacagggacttcatcaag
aacatgatcactggtacctctcaggctgactgtgctgtgctgatcgttgctgccggtgtt
ggtgagttcgaggctggtatctccaagaacggccagacccgtgagcacgctctgctagcc
tatactctgggtgtaaagcagctcattgttggagtcaataaaatggactccactgagccc
ccttacagccagaagcgttttgaggaaatcaccaaggaagtgagtgcctacatcaaaaag
atcggctacaaccccgccactgttgcctttgtccccatctctgggtggcacggagacaac
atgctggaggccagtgacaagatggcctggttcaaaggttggaagattgaccgtaaagag
ggcggtgccaatggtattaccctgctggaggccctggactccatcctgccccccagtcgc
cccactgacaagcctctgcgtctgcccctgcaggatgtctacaagattggcggtattgga
actgtccccgtcggtcgtgttgagaccggtatcctgaagcctggcatggtcgtcaccttt
gctccccccaacctgaccactgaggtgaagtctgtggagatgcaccacgagtctctgcct
gaagccctgcccggtgacaacgtcggcttcaacatcaagaacgtgtccgtcaaggaaatc
cgtcgtggaaacgtggctggcgacagcaagaacgacccccctctggcggctgagaacttc
accgctcaggtcatcatcctgaaccaccccggccagatctcccagggttacgcccctgtg
ctggattgccacaccgctcacattgcctgcaagttcagcgagctcaaggagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaaggctcttaagtccggagacgccgcc
atcatcaccatggtgcctggaaaacccatgtgtgttgagagcttctcccagtatccccca
ctgggtcgctttgctgtgcgtgacatgaggcagaccgtggccgtcggtgtcatcaagtcc
gtcgagaagaaggccgcaagcggtggaaaggtcaccaagtctgcacagaaggccgagaag
aagaaatga
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