KEGG   Lates calcarifer (barramundi perch): 108898913
Entry
108898913         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: negative elongation factor C/D
  KO
K15181  negative elongation factor C/D
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108898913
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcf03021]
    108898913
Transcription machinery [BR:lcf03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     108898913
SSDB
Motif
Pfam: TH1 DUF4817
Other DBs
NCBI-GeneID: 108898913
NCBI-ProteinID: XP_018554560
LinkDB
Position
LG12:complement(20334066..20340106)
AA seq 578 aa
MDEEYYSGAGDWEGTEGNMEDYVEGENDGKIQEDCLQKFSSRDYIMEPAIFNTLKTYFQA
GGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQKA
DSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVS
TACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILAQEE
QGGSAVRRIGQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADITV
LFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWKK
NKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVAMGVLKWVD
WTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLEL
KKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQL
FLPILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMIN
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggacgaagagtattacagcggggcaggggactgggaaggaacggagggcaacatggag
gattacgttgaaggagaaaatgacgggaaaatccaggaagactgtctgcagaaattctcc
agcagggactacatcatggagcctgccattttcaacactcttaaaacgtatttccaggct
ggtggctctccagaacacgtcatccagcttctctctgaaaactactctgctgtggctcag
actgttaatctgctggcagagtggctcatccagatgggtgtagagcctgctcaggtccaa
gagcgagtagaaaatcacctgaagagtctcctgataaagcactttgacccccagaaagca
gattccattttcactgttgagggagagactcctgcttggcttgaacagatgatagcacac
acaacgtggagagatctcttctataagctggcagaggctcatccagactgcctgatgctc
aacttcactgtgaagctcatttcagacgctggttaccagggtgagatcaccagcgtgtct
acggcgtgtcagcaactggaggttttctcccgagtactgaggacatctttggccacgctg
ctggatggaggagaggaaaacctggagaagaacctgccagaatttgctaagatggtgtgt
catggtgagcacacctacctcttcgcccaggcaatgatgtcaatcctggctcaggaggaa
cagggcggttcagccgtacgcaggatcggacaggaggtgcagaagtctgcacacgagaga
ggtcatgatgccagtcagataaccctcgcactcggtaccgcagcagcctaccctcgagcc
tgccaggcactgggtgccatgttgtctaaaggagccctgaatcctgcagatatcacagtt
ctgttcaagatgttcagcagcatggaccctcctcctgtggagctgattagagtgcccgcc
tttctggacctgttcatgcagtcactgtttaagcctggttcaaagatcaaccaagaccat
aaacacaaatacatccatatcctggcctacgctgccagcgtggtcgagacgtggaaaaag
aacaagcgagttaacatcaacaaagacgagctgaagtcaacatctaaggccatagagact
gtgcacaacctgtgctgcaatgagaacaaaggagccacagagctggtggctgaactcggc
actttgtaccagtgcattcggtttccagtagttgccatgggggttttaaaatgggtggac
tggacagtgtctgagccacggtactttcagctccagactgaccacactccagttcattta
gctctgctggacgagatctgtacgtgtcaccagctgctgcacccgcaggtcctccagctg
ctcatcaaactgtttgaaacagagcactctcagctggacgtcatggagcagctcgaatta
aagaagactctgctggacagaatggttcatcttttgagtcgtggctacgtcctgcctgta
gttggttatatccgaaaatgtctagagaaacttaacacggatatctccctcattagatac
tttgtcactgaggtgctggatgtgattgcacctccctacacatcagactttgtccagctc
ttcctgcccatcctggagaacgacagcatcgcagggacgatccgcacagagggagaacac
gatcctgtcgctgagttcattgctcattgcaagtcaaacttcataatgattaactga

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